RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 DMXL1Q9Y485 3027 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 PAPSS2O95340 614 aaPredicted RBP25.12■■□□□ 1.61
C9orf47-202ENST00000375850 PLCG1P19174 1290 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 GUCY2FP51841 1108 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 KPNA1P52294 538 aaPredicted RBP25.12■■□□□ 1.61
C9orf47-202ENST00000375850 PLCB2Q00722 1185 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 DHX8Q14562 1220 aaKnown RBP25.12■■□□□ 1.61
C9orf47-202ENST00000375850 DGKKQ5KSL6 1271 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 LARP1BQ659C4 914 aaKnown RBP25.12■■□□□ 1.61
C9orf47-202ENST00000375850 THEM5Q8N1Q8 247 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 FAM200AQ8TCP9 573 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 LARP4BQ92615 738 aaKnown RBP25.12■■□□□ 1.61
C9orf47-202ENST00000375850 HVCN1Q96D96 273 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 GCNAQ96QF7 691 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 ZHX3Q9H4I2 956 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 SLC27A5Q9Y2P5 690 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 STYXL1Q9Y6J8 313 aa25.12■■□□□ 1.61
C9orf47-202ENST00000375850 FRYLO94915 3013 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 MYBPHLA2RUH7 354 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 GABRR2P28476 465 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 CDC25CP30307 473 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 CNR2P34972 360 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 MCM6Q14566 821 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 ADALQ6DHV7 355 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 LAIR1Q6GTX8 287 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 SLC39A4Q6P5W5 647 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 GAREM2Q75VX8 874 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 NT5DC4Q86YG4 428 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 KRI1Q8N9T8 703 aaKnown RBP25.11■■□□□ 1.61
C9orf47-202ENST00000375850 FIZ1Q96SL8 496 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 CCSER1Q9C0I3 900 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 ZCWPW1Q9H0M4 648 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 COL4A2P08572 1712 aa25.11■■□□□ 1.61
C9orf47-202ENST00000375850 PPEF2O14830 753 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 LRP3O75074 770 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 NFICP08651 508 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 DDIT3P35638 169 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 TAF6P49848 677 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 POSTNQ15063 836 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 GPR158Q5T848 1215 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 SYNPOQ8N3V7 929 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 SPPL2BQ8TCT7 592 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 RSPRY1Q96DX4 576 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 MKNK1Q9BUB5 465 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 TASP1Q9H6P5 420 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 AGO2Q9UKV8 859 aaKnown RBP25.1■■□□□ 1.61
C9orf47-202ENST00000375850 NCANO14594 1321 aa25.1■■□□□ 1.61
C9orf47-202ENST00000375850 MED19A0JLT2 244 aaPredicted RBP25.09■■□□□ 1.61
C9orf47-202ENST00000375850 KARSQ15046 597 aaKnown RBP25.09■■□□□ 1.61
C9orf47-202ENST00000375850 PTPAQ15257 358 aa25.09■■□□□ 1.61
C9orf47-202ENST00000375850 TMEM130Q8N3G9 435 aa25.09■■□□□ 1.61
C9orf47-202ENST00000375850 OR10T2Q8NGX3 314 aa25.09■■□□□ 1.61
C9orf47-202ENST00000375850 THG1LQ9NWX6 298 aaKnown RBP25.09■■□□□ 1.61
C9orf47-202ENST00000375850 CDV3Q9UKY7 258 aaKnown RBP25.09■■□□□ 1.61
C9orf47-202ENST00000375850 CEP250Q9BV73 2442 aa25.09■■□□□ 1.61
C9orf47-202ENST00000375850 SPECC1L-ADORA2AF8WAN1 911 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 IL18RAPO95256 599 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 NMT1P30419 496 aaKnown RBP25.08■■□□□ 1.61
C9orf47-202ENST00000375850 CTHP32929 405 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 TAF12Q16514 161 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 MGAT5BQ3V5L5 792 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 SLC39A12Q504Y0 691 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 BPIFB1Q8TDL5 484 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 LRRC15Q8TF66 581 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 SEPT5Q99719 369 aaPredicted RBP25.08■■□□□ 1.61
C9orf47-202ENST00000375850 DPP3Q9NY33 737 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 SEL1LQ9UBV2 794 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 STK17AQ9UEE5 414 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 USP18Q9UMW8 372 aa25.08■■□□□ 1.61
C9orf47-202ENST00000375850 SLC38A8A6NNN8 435 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 SOBPA7XYQ1 873 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 CYB561D2O14569 222 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 RETP07949 1114 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 PNPLA4P41247 253 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 ACOT2P49753 483 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 SF3A1Q15459 793 aaKnown RBP25.07■■□□□ 1.6
C9orf47-202ENST00000375850 SV2CQ496J9 727 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 STXBP5Q5T5C0 1151 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 DCP1BQ8IZD4 617 aaKnown RBP25.07■■□□□ 1.6
C9orf47-202ENST00000375850 ZNF560Q96MR9 790 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 TMEM209Q96SK2 561 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 RTKNQ9BST9 563 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 CCDC39Q9UFE4 941 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 EXOC7Q9UPT5 735 aa25.07■■□□□ 1.6
C9orf47-202ENST00000375850 ANKRD63C9JTQ0 380 aa25.06■■□□□ 1.6
C9orf47-202ENST00000375850 FOXD2O60548 495 aaPredicted RBP25.06■■□□□ 1.6
C9orf47-202ENST00000375850 HOXA6P31267 233 aa25.06■■□□□ 1.6
C9orf47-202ENST00000375850 SATB1Q01826 763 aa25.06■■□□□ 1.6
C9orf47-202ENST00000375850 ZNF720Q7Z2F6 126 aa25.06■■□□□ 1.6
C9orf47-202ENST00000375850 LONP2Q86WA8 852 aa25.06■■□□□ 1.6
C9orf47-202ENST00000375850 TTC9BQ8N6N2 239 aa25.06■■□□□ 1.6
C9orf47-202ENST00000375850 PYM1Q9BRP8 204 aaKnown RBP25.06■■□□□ 1.6
C9orf47-202ENST00000375850 ATF6P18850 670 aa25.05■■□□□ 1.6
C9orf47-202ENST00000375850 TGM1P22735 817 aa25.05■■□□□ 1.6
C9orf47-202ENST00000375850 DDX6P26196 483 aaKnown RBP eCLIP25.05■■□□□ 1.6
C9orf47-202ENST00000375850 GAS6Q14393 721 aa25.05■■□□□ 1.6
C9orf47-202ENST00000375850 ZC2HC1CQ53FD0 456 aaPredicted RBP25.05■■□□□ 1.6
C9orf47-202ENST00000375850 POMGNT1Q8WZA1 660 aa25.05■■□□□ 1.6
C9orf47-202ENST00000375850 TICRRQ7Z2Z1 1910 aa25.05■■□□□ 1.6
C9orf47-202ENST00000375850 KPNA7A9QM74 516 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms