RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 COBLL1Q53SF7 1204 aa23.39■■□□□ 1.33
NINJ1-201ENST00000375446 GET4Q7L5D6 327 aaPredicted RBP23.39■■□□□ 1.33
NINJ1-201ENST00000375446 TMEM86AQ8N2M4 240 aa23.39■■□□□ 1.33
NINJ1-201ENST00000375446 TOP6BLQ8N6T0 577 aa23.39■■□□□ 1.33
NINJ1-201ENST00000375446 MYADMQ96S97 322 aa23.39■■□□□ 1.33
NINJ1-201ENST00000375446 C1QTNF1Q9BXJ1 281 aa23.39■■□□□ 1.33
NINJ1-201ENST00000375446 HCFC1R1Q9NWW0 138 aa23.39■■□□□ 1.33
NINJ1-201ENST00000375446 DNMT3BQ9UBC3 853 aaKnown RBP23.39■■□□□ 1.33
NINJ1-201ENST00000375446 DENND4AQ7Z401 1863 aa23.39■■□□□ 1.33
NINJ1-201ENST00000375446 MTMR11A4FU01 709 aa23.38■■□□□ 1.33
NINJ1-201ENST00000375446 DUSP4Q13115 394 aa23.38■■□□□ 1.33
NINJ1-201ENST00000375446 ADAM9Q13443 819 aa23.38■■□□□ 1.33
NINJ1-201ENST00000375446 PTPN21Q16825 1174 aa23.38■■□□□ 1.33
NINJ1-201ENST00000375446 SLC39A12Q504Y0 691 aa23.38■■□□□ 1.33
NINJ1-201ENST00000375446 CENPPQ6IPU0 288 aa23.38■■□□□ 1.33
NINJ1-201ENST00000375446 ATAD1Q8NBU5 361 aa23.38■■□□□ 1.33
NINJ1-201ENST00000375446 TMC2Q8TDI7 906 aa23.38■■□□□ 1.33
NINJ1-201ENST00000375446 CRISPLD1Q9H336 500 aa23.38■■□□□ 1.33
NINJ1-201ENST00000375446 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.38■■□□□ 1.333e-6■■■□□ 16
NINJ1-201ENST00000375446 MAPK13O15264 365 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 PHACTR2O75167 634 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 AKAP3O75969 853 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 DLG4P78352 724 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 TWF1Q12792 350 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 TRPC3Q13507 836 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 SOWAHAQ2M3V2 549 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 EDRF1Q3B7T1 1238 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 PABPC1LQ4VXU2 614 aaKnown RBP23.37■■□□□ 1.33
NINJ1-201ENST00000375446 DPH6Q7L8W6 267 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 ADGRF2Q8IZF7 708 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 SPATA18Q8TC71 538 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 DDX43Q9NXZ2 648 aaKnown RBP23.37■■□□□ 1.33
NINJ1-201ENST00000375446 MAN1B1Q9UKM7 699 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 YIPF1Q9Y548 306 aa23.37■■□□□ 1.33
NINJ1-201ENST00000375446 TSC2P49815 1807 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 ASGR2P07307 311 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 PTPN2P17706 415 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 PSMC2P35998 433 aaKnown RBP23.36■■□□□ 1.33
NINJ1-201ENST00000375446 TSPY1Q01534 308 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 BIRC3Q13489 604 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 TDRD10Q5VZ19 366 aaKnown RBP23.36■■□□□ 1.33
NINJ1-201ENST00000375446 ISM2Q6H9L7 571 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 LIMS2Q7Z4I7 341 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 LRRTM3Q86VH5 581 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 OSTM1Q86WC4 334 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 FAM186BQ8IYM0 893 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 DCP1BQ8IZD4 617 aaKnown RBP23.36■■□□□ 1.33
NINJ1-201ENST00000375446 ADSSL1Q8N142 457 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 ELMOD1Q8N336 334 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 EPS15L1Q9UBC2 864 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 SLC27A5Q9Y2P5 690 aa23.36■■□□□ 1.33
NINJ1-201ENST00000375446 GABRDO14764 452 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 C4BPAP04003 597 aaKnown RBP23.35■■□□□ 1.33
NINJ1-201ENST00000375446 RHOP08100 348 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 LHX1P48742 406 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 MYL6P60660 151 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 MYL7Q01449 175 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 SMARCB1Q12824 385 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 ITFG1Q8TB96 612 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 EDAQ92838 391 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 ZNF512Q96ME7 567 aaPredicted RBP23.35■■□□□ 1.33
NINJ1-201ENST00000375446 MMS19Q96T76 1030 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 ACBD6Q9BR61 282 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 CORO1BQ9BR76 489 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 XYLT2Q9H1B5 865 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 CEP72Q9P209 647 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 HSFX1Q9UBD0 423 aa23.35■■□□□ 1.33
NINJ1-201ENST00000375446 IKBKBO14920 756 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 STAU1O95793 577 aaKnown RBP23.34■■□□□ 1.33
NINJ1-201ENST00000375446 LAMP2P13473 410 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 ATICP31939 592 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 ALDH1A3P47895 512 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 VAMP7P51809 220 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 CDR1P51861 262 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 ZXDAP98168 799 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 PLD1Q13393 1074 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 C1orf220Q5T0J3 134 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 IQCEQ6IPM2 695 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 CLEC17AQ6ZS10 378 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 INTS8Q75QN2 995 aaKnown RBP23.34■■□□□ 1.33
NINJ1-201ENST00000375446 TTC9BQ8N6N2 239 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 C2orf15Q8WU43 125 aaKnown RBP23.34■■□□□ 1.33
NINJ1-201ENST00000375446 SYAP1Q96A49 352 aaPredicted RBP23.34■■□□□ 1.33
NINJ1-201ENST00000375446 TSG101Q99816 390 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 C11orf16Q9NQ32 467 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 AVENQ9NQS1 362 aaPredicted RBP23.34■■□□□ 1.33
NINJ1-201ENST00000375446 CDH7Q9ULB5 785 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 SORCS3Q9UPU3 1222 aa23.34■■□□□ 1.33
NINJ1-201ENST00000375446 MRPS23Q9Y3D9 190 aaKnown RBP23.34■■□□□ 1.33
NINJ1-201ENST00000375446 ZFP37Q9Y6Q3 630 aaPredicted RBP23.34■■□□□ 1.33
NINJ1-201ENST00000375446 FAM86C2PA6NEL3 165 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 CETN3O15182 167 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 KRT13P13646 458 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 ACAT1P24752 427 aaKnown RBP23.33■■□□□ 1.33
NINJ1-201ENST00000375446 PCSK1P29120 753 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 EPHB3P54753 998 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 TNNC1P63316 161 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 STIM1Q13586 685 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 NCOA4Q13772 614 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 WDR72Q3MJ13 1102 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms