RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 MMP13P45452 471 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 MAMLD1Q13495 774 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 ZFYVE27Q5T4F4 411 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 LMBRD2Q68DH5 695 aaPredicted RBP12.96□□□□□ -0.33
UBR4-203ENST00000375225 DNAJC24Q6P3W2 148 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 CCDC25Q86WR0 208 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 FBXO16Q8IX29 292 aaPredicted RBP12.96□□□□□ -0.33
UBR4-203ENST00000375225 C1orf54Q8WWF1 131 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 RNF25Q96BH1 459 aaPredicted RBP12.96□□□□□ -0.33
UBR4-203ENST00000375225 CABS1Q96KC9 395 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 XPO6Q96QU8 1125 aaKnown RBP12.96□□□□□ -0.33
UBR4-203ENST00000375225 OSBPL8Q9BZF1 889 aa12.96□□□□□ -0.33
UBR4-203ENST00000375225 INTS9Q9NV88 658 aaKnown RBP12.96□□□□□ -0.33
UBR4-203ENST00000375225 CHORDC1Q9UHD1 332 aaPredicted RBP12.96□□□□□ -0.33
UBR4-203ENST00000375225 TRIM66O15016 1216 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 ALDH1A1P00352 501 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 HARSP12081 509 aaKnown RBP12.95□□□□□ -0.34
UBR4-203ENST00000375225 EIF4BP23588 611 aaKnown RBP12.95□□□□□ -0.34
UBR4-203ENST00000375225 PTPN7P35236 360 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 TM4SF4P48230 202 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 ZNF132P52740 706 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 TMEM132AQ24JP5 1023 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 ERMARDQ5T6L9 678 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 RNF187Q5TA31 235 aaPredicted RBP12.95□□□□□ -0.34
UBR4-203ENST00000375225 DRICH1Q6PGQ1 229 aaPredicted RBP12.95□□□□□ -0.34
UBR4-203ENST00000375225 DCUN1D2Q6PH85 259 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 MMS22LQ6ZRQ5 1243 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 GSTA5Q7RTV2 222 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 RIBC1Q8N443 379 aaPredicted RBP12.95□□□□□ -0.34
UBR4-203ENST00000375225 ZNF606Q8WXB4 792 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 RAPGEF5Q92565 580 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 TTC25Q96NG3 672 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 SEMA4AQ9H3S1 761 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 RABEP2Q9H5N1 569 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 PPCSQ9HAB8 311 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 APOBEC3GQ9HC16 384 aaKnown RBP12.95□□□□□ -0.34
UBR4-203ENST00000375225 SAMD15Q9P1V8 674 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 PCDHGC3Q9UN70 934 aa12.95□□□□□ -0.34
UBR4-203ENST00000375225 LGR5O75473 907 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 TCEA3O75764 348 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 FSBPO95073 299 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 SHBGP04278 402 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 TXNP10599 105 aaKnown RBP12.94□□□□□ -0.34
UBR4-203ENST00000375225 RALAP11233 206 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 P4HA1P13674 534 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 FGFR4P22455 802 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 MMP8P22894 467 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 KCNJ1P48048 391 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 TNFAIP2Q03169 654 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 LAMTOR4Q0VGL1 99 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 NOGQ13253 232 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 SNX1Q13596 522 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 HADHQ16836 314 aaKnown RBP12.94□□□□□ -0.34
UBR4-203ENST00000375225 LY6KQ17RY6 165 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 SPOPLQ6IQ16 392 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 MPZL3Q6UWV2 235 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 C17orf99Q6UX52 265 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 MAMDC4Q6UXC1 1216 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
UBR4-203ENST00000375225 TTC39CQ8N584 583 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 PRPF31Q8WWY3 499 aaKnown RBP12.94□□□□□ -0.34
UBR4-203ENST00000375225 ZBTB45Q96K62 511 aaPredicted RBP12.94□□□□□ -0.34
UBR4-203ENST00000375225 ACO2Q99798 780 aaKnown RBP12.94□□□□□ -0.34
UBR4-203ENST00000375225 PLCD4Q9BRC7 762 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 MIS12Q9H081 205 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 EPB41L4BQ9H329 900 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 CDC42EP4Q9H3Q1 356 aaKnown RBP12.94□□□□□ -0.34
UBR4-203ENST00000375225 SMARCAD1Q9H4L7 1026 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 FAM124BQ9H5Z6 455 aaPredicted RBP12.94□□□□□ -0.34
UBR4-203ENST00000375225 CCDC134Q9H6E4 229 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.94□□□□□ -0.34
UBR4-203ENST00000375225 WDR35Q9P2L0 1181 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 NUB1Q9Y5A7 615 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 UMODL1Q5DID0 1318 aa12.94□□□□□ -0.34
UBR4-203ENST00000375225 TCRBV7S2A1N4TA0A589 114 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 FAM170AA1A519 330 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 HBP1O60381 514 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 TTC4O95801 387 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 CHN1P15882 459 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 TMOD1P28289 359 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 ITGA8P53708 1063 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 SEC24CP53992 1094 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 NFX1Q12986 1120 aaKnown RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 NR1H3Q13133 447 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 KLF1Q13351 362 aaPredicted RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 STAT4Q14765 748 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 CELF3Q5SZQ8 465 aaKnown RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 RHBDF2Q6PJF5 856 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 PCGF5Q86SE9 256 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 ERICH1Q86X53 443 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 PASD1Q8IV76 773 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 DHX37Q8IY37 1157 aaKnown RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 ZDHHC14Q8IZN3 488 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 NIPA2Q8N8Q9 360 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 TTC13Q8NBP0 860 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 DYDC1Q8WWB3 177 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 MAML3Q96JK9 1138 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 CCDC113Q9H0I3 377 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms