RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 IPO4Q8TEX9 1081 aaKnown RBP14.77□□□□□ -0.04
HMGCL-203ENST00000374490 KAT2BQ92831 832 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 TARS2Q9BW92 718 aaKnown RBP14.77□□□□□ -0.04
HMGCL-203ENST00000374490 ZNF518BQ9C0D4 1074 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 AAASQ9NRG9 546 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 NEU2Q9Y3R4 380 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 LCTP09848 1927 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 GSTA1P08263 222 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 ABHD2P08910 425 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 RALAP11233 206 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 PTPN7P35236 360 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 YWHAEP62258 255 aaKnown RBP14.77□□□□□ -0.05
HMGCL-203ENST00000374490 SP3Q02447 781 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 NEDD9Q14511 834 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 ARHGEF6Q15052 776 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 CNGA2Q16280 664 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 ANKRD20A8PQ5CZ79 823 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 CCDC13Q8IYE1 715 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 TCP11Q8WWU5 503 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 TRIM7Q9C029 511 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 LGALS13Q9UHV8 139 aa14.77□□□□□ -0.05
HMGCL-203ENST00000374490 KIAA1217Q5T5P2 1943 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 PTPRJQ12913 1337 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 TLR3O15455 904 aaKnown RBP14.76□□□□□ -0.05
HMGCL-203ENST00000374490 MMP8P22894 467 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 ALDH5A1P51649 535 aaPredicted RBP14.76□□□□□ -0.05
HMGCL-203ENST00000374490 STAT4Q14765 748 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 IER5Q5VY09 327 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 ICE2Q659A1 982 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 SPOPLQ6IQ16 392 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 PIGWQ7Z7B1 504 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 GTF3C2Q8WUA4 911 aaPredicted RBP14.76□□□□□ -0.05
HMGCL-203ENST00000374490 ATG4AQ8WYN0 398 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 PTPN18Q99952 460 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 MRPL4Q9BYD3 311 aaKnown RBP14.76□□□□□ -0.05
HMGCL-203ENST00000374490 DDX56Q9NY93 547 aaKnown RBP14.76□□□□□ -0.05
HMGCL-203ENST00000374490 ANKFY1Q9P2R3 1169 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 NUB1Q9Y5A7 615 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 ACTL7BQ9Y614 415 aa14.76□□□□□ -0.05
HMGCL-203ENST00000374490 PDE4DIPQ5VU43 2346 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 TP73O15350 636 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 MAFO75444 373 aaPredicted RBP14.75□□□□□ -0.05
HMGCL-203ENST00000374490 TJP3O95049 919 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 ASS1P00966 412 aaKnown RBP14.75□□□□□ -0.05
HMGCL-203ENST00000374490 CALCAP01258 141 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 CETPP11597 493 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 HNRNPH1P31943 449 aaKnown RBP14.75□□□□□ -0.05
HMGCL-203ENST00000374490 CHKAP35790 457 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 SLCO1A2P46721 670 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 GTF2A2P52657 109 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 WNT7BP56706 349 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 TAS2R40P59535 323 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 SP2Q02086 613 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 NR1H3Q13133 447 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 MOGSQ13724 837 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 CAPSQ13938 189 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 KCTD19Q17RG1 926 aaPredicted RBP14.75□□□□□ -0.05
HMGCL-203ENST00000374490 IZUMO3Q5VZ72 239 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 EXOC3L1Q86VI1 746 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 ZBTB8OSQ8IWT0 167 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 TMEM35BQ8NCS4 154 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 UHMK1Q8TAS1 419 aaKnown RBP14.75□□□□□ -0.05
HMGCL-203ENST00000374490 CCT6BQ92526 530 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 ARHGEF2Q92974 986 aaKnown RBP14.75□□□□□ -0.05
HMGCL-203ENST00000374490 ZBTB45Q96K62 511 aaPredicted RBP14.75□□□□□ -0.05
HMGCL-203ENST00000374490 MPHOSPH6Q99547 160 aaKnown RBP14.75□□□□□ -0.05
HMGCL-203ENST00000374490 DDX23Q9BUQ8 820 aaKnown RBP14.75□□□□□ -0.05
HMGCL-203ENST00000374490 NIF3L1Q9GZT8 377 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 HAPLN2Q9GZV7 340 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 CCDC113Q9H0I3 377 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 C2orf40Q9H1Z8 148 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 NINJ2Q9NZG7 142 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 TELO2Q9Y4R8 837 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 CEP83Q9Y592 693 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 WDR81Q562E7 1941 aa14.75□□□□□ -0.05
HMGCL-203ENST00000374490 ZNFX1Q9P2E3 1918 aaKnown RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 CCL15-CCL14A0A0B4J2E2 113 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 GSTTP1A0A1W2PQM5 241 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 TMEM191CA6NGB0 347 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 CCT8L1PA6NM43 557 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 PEX10O60683 326 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 TOM1L1O75674 476 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 CNMDO75829 334 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 DNAJC8O75937 253 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 FARP2O94887 1054 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 ACSL3O95573 720 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 TMEM191BP0C7N4 346 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 TGFB3P10600 412 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 UBA1P22314 1058 aaKnown RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 EDNRBP24530 442 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 SSR1P43307 286 aaKnown RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 STAT5BP51692 787 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 NFX1Q12986 1120 aaKnown RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 CCL15Q16663 113 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 SGSM1Q2NKQ1 1148 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 GPAT2Q6NUI2 795 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 PASD1Q8IV76 773 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 LRRC34Q8IZ02 419 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 ZCCHC9Q8N567 271 aaKnown RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 ZNF606Q8WXB4 792 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms