RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 TTC9BQ8N6N2 239 aa17.11■□□□□ 0.33
TRAPPC3-203ENST00000373163 ACDQ96AP0 544 aa17.11■□□□□ 0.33
TRAPPC3-203ENST00000373163 GCNAQ96QF7 691 aa17.11■□□□□ 0.33
TRAPPC3-203ENST00000373163 MTMR9Q96QG7 549 aa17.11■□□□□ 0.33
TRAPPC3-203ENST00000373163 ACO2Q99798 780 aaKnown RBP17.11■□□□□ 0.33
TRAPPC3-203ENST00000373163 P2RY13Q9BPV8 354 aa17.11■□□□□ 0.33
TRAPPC3-203ENST00000373163 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
TRAPPC3-203ENST00000373163 TUBGCP4Q9UGJ1 667 aa17.11■□□□□ 0.33
TRAPPC3-203ENST00000373163 MTMR11A4FU01 709 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 CDKL5O76039 1030 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 MCF2P10911 925 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.336e-6■□□□□ 10.3
TRAPPC3-203ENST00000373163 CDC25CP30307 473 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 LMAN2Q12907 356 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 NAIF1Q69YI7 327 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 TSTD1Q8NFU3 115 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 PIGKQ92643 395 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 EXOC4Q96A65 974 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 SLC46A2Q9BY10 475 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
TRAPPC3-203ENST00000373163 ZIC2O95409 532 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 ARSAP15289 507 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 KRT2P35908 639 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 MAPK8P45983 427 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 DHPSP49366 369 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 TRIM61Q5EBN2 209 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 CMTM8Q8IZV2 173 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 TNFRSF25Q93038 417 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 LPIN3Q9BQK8 851 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 TCHPQ9BT92 498 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 TARS2Q9BW92 718 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 TPSD1Q9BZJ3 242 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 IL21Q9HBE4 155 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 EVLQ9UI08 416 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 CCL26Q9Y258 94 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 STK36Q9NRP7 1315 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 SPAG17Q6Q759 2223 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 LAMA1P25391 3075 aa17.09■□□□□ 0.33
TRAPPC3-203ENST00000373163 ANKRD11Q6UB99 2663 aaPredicted RBP17.08■□□□□ 0.33
TRAPPC3-203ENST00000373163 H0Y626 953 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 WNT7AO00755 349 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 TRIM16O95361 564 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 CAPNS1P04632 268 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 HARSP12081 509 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 BCKDHBP21953 392 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 RDXP35241 583 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 BFSP1Q12934 665 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 PSMD2Q13200 908 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 MYBPC2Q14324 1141 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 VEPH1Q14D04 833 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 CC2D1AQ6P1N0 951 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 TMEM130Q8N3G9 435 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 EZH1Q92800 747 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 SEPT5Q99719 369 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 NUSAP1Q9BXS6 441 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 BRMS1Q9HCU9 246 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 HSFX1Q9UBD0 423 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 ZMYM5Q9UJ78 669 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 TBX20Q9UMR3 447 aa17.08■□□□□ 0.32
TRAPPC3-203ENST00000373163 FAM221BA6H8Z2 402 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 CCDC169A6NNP5 214 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 LARGE1O95461 756 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 SEC24BO95487 1268 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 PROZP22891 400 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 GJA4P35212 333 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 AVPR1AP37288 418 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 AARSP49588 968 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 COL28A1Q2UY09 1125 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 SLC10A6Q3KNW5 377 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 OVOS1Q6IE37 1185 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 MPZL3Q6UWV2 235 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 USP13Q92995 863 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 ZSWIM6Q9HCJ5 1215 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 EML5Q05BV3 1969 aa17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 NUP210Q8TEM1 1887 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-203ENST00000373163 ABLIM1O14639 778 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 DTNBO60941 627 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 ENGP17813 658 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 ATF6P18850 670 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 RPA1P27694 616 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 TUFMP49411 452 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 PEX3P56589 373 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 SCRN1Q12765 414 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 SEMA3BQ13214 749 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 PDGFRLQ15198 375 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 TAF12Q16514 161 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 MGAT5BQ3V5L5 792 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 ANO7Q6IWH7 933 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 ARMCX5Q6P1M9 558 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 DSTYKQ6XUX3 929 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 PIP4P1Q86T03 277 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 SKAP1Q86WV1 359 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 CHCHD4Q8N4Q1 142 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 MAB21L3Q8N8X9 362 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 ERMNQ8TAM6 284 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 CD101Q93033 1021 aa17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 CNOT6LQ96LI5 555 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-203ENST00000373163 TMEM60Q9H2L4 133 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms