RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ZNF214Q9UL59 606 aaPredicted RBP13.48□□□□□ -0.25
CTPS1-202ENST00000372621 MAFBQ9Y5Q3 323 aaPredicted RBP13.48□□□□□ -0.25
CTPS1-202ENST00000372621 IVNS1ABPQ9Y6Y0 642 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 LOC285556D6RIA3 1793 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 EXOC1LA0A1B0GW35 172 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 TJP3O95049 919 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 PECAM1P16284 738 aaPredicted RBP13.48□□□□□ -0.25
CTPS1-202ENST00000372621 ELF1P32519 619 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 OAZ1P54368 228 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 FASTKD3Q14CZ7 662 aaKnown RBP13.48□□□□□ -0.25
CTPS1-202ENST00000372621 ZNF526Q8TF50 670 aaPredicted RBP13.48□□□□□ -0.25
CTPS1-202ENST00000372621 KLHL29Q96CT2 875 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 KLHL14Q9P2G3 628 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 STARD13Q9Y3M8 1113 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 GSTTP1A0A1W2PQM5 241 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 EGFRP00533 1210 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 ETS1P14921 441 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 NF2P35240 595 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 SSR1P43307 286 aaKnown RBP13.47□□□□□ -0.25
CTPS1-202ENST00000372621 ARSEP51690 589 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 POLGP54098 1239 aaPredicted RBP13.47□□□□□ -0.25
CTPS1-202ENST00000372621 SP2Q02086 613 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 OGDHQ02218 1023 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 WDR72Q3MJ13 1102 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 ACCSLQ4AC99 568 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 PPP1R15BQ5SWA1 713 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 RNASEH2BQ5TBB1 312 aaKnown RBP13.47□□□□□ -0.25
CTPS1-202ENST00000372621 SNRNP48Q6IEG0 339 aaKnown RBP13.47□□□□□ -0.25
CTPS1-202ENST00000372621 SPOCD1Q6ZMY3 1216 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 NIM1KQ8IY84 436 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 GIMAP7Q8NHV1 300 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 AGAP11Q8TF27 550 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 PITPNM3Q9BZ71 974 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 STAM2O75886 525 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 ATG7O95352 703 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 CETN2P41208 172 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 BACE1P56817 501 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 MORF4L2Q15014 288 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 KAZNQ674X7 775 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 KIF2BQ8N4N8 673 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 MSTO1Q9BUK6 570 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 TARS2Q9BW92 718 aaKnown RBP13.47□□□□□ -0.25
CTPS1-202ENST00000372621 CYP39A1Q9NYL5 469 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 FBXO40Q9UH90 709 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 GRID1Q9ULK0 1009 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 ZNF148Q9UQR1 794 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.47□□□□□ -0.25
CTPS1-202ENST00000372621 hCG_1818297A0A087WSY0 165 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 LOC102724159A0A0B4J2E5 919 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 A0A1B0GUA9 196 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 F8VP50 259 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 K7ERI5 159 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 ALOX15BO15296 676 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 NCOA4Q13772 614 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 PWP2Q15269 919 aaKnown RBP13.47□□□□□ -0.25
CTPS1-202ENST00000372621 RASA2Q15283 850 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 TXNRD3NBQ6F5E7 133 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
CTPS1-202ENST00000372621 STAMBPL1Q96FJ0 436 aa13.47□□□□□ -0.25
CTPS1-202ENST00000372621 UNC5CO95185 931 aa13.46□□□□□ -0.25
CTPS1-202ENST00000372621 KRT1P04264 644 aa13.46□□□□□ -0.25
CTPS1-202ENST00000372621 ITGAVP06756 1048 aa13.46□□□□□ -0.25
CTPS1-202ENST00000372621 ATF7P17544 494 aaPredicted RBP13.46□□□□□ -0.25
CTPS1-202ENST00000372621 VCPP55072 806 aaKnown RBP13.46□□□□□ -0.25
CTPS1-202ENST00000372621 GPS1Q13098 491 aa13.46□□□□□ -0.25
CTPS1-202ENST00000372621 MOGSQ13724 837 aa13.46□□□□□ -0.25
CTPS1-202ENST00000372621 TRIM33Q9UPN9 1127 aa13.46□□□□□ -0.25
CTPS1-202ENST00000372621 L3MBTL1Q9Y468 752 aa13.46□□□□□ -0.25
CTPS1-202ENST00000372621 FAM189A1O60320 539 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 SPAG7O75391 227 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 LSM8O95777 96 aaKnown RBP13.46□□□□□ -0.26
CTPS1-202ENST00000372621 ASS1P00966 412 aaKnown RBP13.46□□□□□ -0.26
CTPS1-202ENST00000372621 CST3P01034 146 aaPredicted RBP13.46□□□□□ -0.26
CTPS1-202ENST00000372621 OATP04181 439 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 CALB1P05937 261 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 CDKN2BP42772 138 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 TGFB2P61812 414 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 TNFAIP1Q13829 316 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 PKN2Q16513 984 aaKnown RBP13.46□□□□□ -0.26
CTPS1-202ENST00000372621 NIPA2Q8N8Q9 360 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 MCEEQ96PE7 176 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 TRABDQ9H4I3 376 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 KIF9Q9HAQ2 790 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 ANKFY1Q9P2R3 1169 aa13.46□□□□□ -0.26
CTPS1-202ENST00000372621 C3orf70A6NLC5 250 aaPredicted RBP13.45□□□□□ -0.26
CTPS1-202ENST00000372621 A8MUI8 341 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 TYROBPO43914 113 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 MSH2P43246 934 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 YARSP54577 528 aaKnown RBP13.45□□□□□ -0.26
CTPS1-202ENST00000372621 TMEM132BQ14DG7 1078 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 TFDP3Q5H9I0 405 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 FAM47EQ6ZV65 393 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 WDTC1Q8N5D0 677 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 DEPTORQ8TB45 409 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 N4BP2L2Q92802 583 aaPredicted RBP13.45□□□□□ -0.26
CTPS1-202ENST00000372621 TMEM134Q9H6X4 195 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 SMG5Q9UPR3 1016 aaKnown RBP13.45□□□□□ -0.26
CTPS1-202ENST00000372621 SHOC2Q9UQ13 582 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 LRRIQ4A6NIV6 560 aa13.45□□□□□ -0.26
CTPS1-202ENST00000372621 ATP2A1O14983 1001 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms