RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 TNFAIP3P21580 790 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 CXCR5P32302 372 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 NOP2P46087 812 aaKnown RBP17.14■□□□□ 0.33
C9orf78-201ENST00000372447 SCNN1GP51170 649 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 POU5F1Q01860 360 aaKnown RBP17.14■□□□□ 0.33
C9orf78-201ENST00000372447 ITIH3Q06033 890 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 PAN2Q504Q3 1202 aaKnown RBP17.14■□□□□ 0.33
C9orf78-201ENST00000372447 GLRA4Q5JXX5 417 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 BRSK2Q8IWQ3 736 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 HNRNPLLQ8WVV9 542 aaKnown RBP17.14■□□□□ 0.33
C9orf78-201ENST00000372447 ZMAT2Q96NC0 199 aaKnown RBP17.14■□□□□ 0.33
C9orf78-201ENST00000372447 PSMB7Q99436 277 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 CNTN3Q9P232 1028 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 COL4A6Q14031 1691 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 SMIM28A0A1B0GU29 152 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 MYOGP15173 224 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 GALCP54803 685 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 CBX1P83916 185 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 CCDC181Q5TID7 509 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 FBXL13Q8NEE6 735 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 RPS6KC1Q96S38 1066 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 AGPAT1Q99943 283 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 TBC1D13Q9NVG8 400 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 RAB20Q9NX57 234 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 HCSTQ9UBK5 93 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 RNF14Q9UBS8 474 aa17.13■□□□□ 0.33
C9orf78-201ENST00000372447 A0A1W2PPC1 479 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 LCHNA4D1U4 455 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 ERLIN1O75477 346 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 DLATP10515 647 aaKnown RBP17.12■□□□□ 0.33
C9orf78-201ENST00000372447 PBX2P40425 430 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 PAFAH1B1P43034 410 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 MFAP3P55082 362 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
C9orf78-201ENST00000372447 WDR93Q6P2C0 686 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 SV2AQ7L0J3 742 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 KAT5Q92993 513 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 ASB7Q9H672 318 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 KANSL3Q9P2N6 904 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 TARSL2A2RTX5 802 aaKnown RBP17.12■□□□□ 0.33
C9orf78-201ENST00000372447 THP07101 528 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 TMEM253P0C7T8 217 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 KCNE1P15382 129 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 VSNL1P62760 191 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 C2orf54Q08AI8 447 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 JADE1Q6IE81 842 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 ZNF280BQ86YH2 543 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 CD302Q8IX05 232 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 FAM71AQ8IYT1 594 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 CMTR2Q8IYT2 770 aaKnown RBP17.12■□□□□ 0.33
C9orf78-201ENST00000372447 PPM1KQ8N3J5 372 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 LRRC57Q8N9N7 239 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 SPATA4Q8NEY3 305 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 TPCN2Q8NHX9 752 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 URGCPQ8TCY9 931 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
C9orf78-201ENST00000372447 TAS1R2Q8TE23 839 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 RSPH1Q8WYR4 309 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 KREMEN1Q96MU8 473 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 PPP1R10Q96QC0 940 aaKnown RBP17.12■□□□□ 0.33
C9orf78-201ENST00000372447 PBX4Q9BYU1 374 aa17.12■□□□□ 0.33
C9orf78-201ENST00000372447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.33
C9orf78-201ENST00000372447 SEPT11Q9NVA2 429 aaKnown RBP17.12■□□□□ 0.33
C9orf78-201ENST00000372447 YBX2Q9Y2T7 364 aaKnown RBP17.12■□□□□ 0.33
C9orf78-201ENST00000372447 TRIOBPQ9H2D6 2365 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 MYH10P35580 1976 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 TMCO5BA8MYB1 307 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 B4GALT3O60512 393 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 DDHD2O94830 711 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 IL18RAPO95256 599 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 CLDN10P78369 228 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 PSMD6Q15008 389 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 LONRF2Q1L5Z9 754 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 CFAP221Q4G0U5 840 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 KRT222Q8N1A0 295 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 LRRC43Q8N309 656 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 MMGT1Q8N4V1 131 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 SLC20A1Q8WUM9 679 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 KIF12Q96FN5 646 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 NT5C1BQ96P26 610 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 MRPL9Q9BYD2 267 aaKnown RBP17.11■□□□□ 0.33
C9orf78-201ENST00000372447 CWH43Q9H720 699 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 PCDHA11Q9Y5I1 949 aa17.11■□□□□ 0.33
C9orf78-201ENST00000372447 FNDC1Q4ZHG4 1894 aaPredicted RBP17.11■□□□□ 0.33
C9orf78-201ENST00000372447 MCM3P25205 808 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 USP8P40818 1118 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 RNASELQ05823 741 aaKnown RBP17.1■□□□□ 0.33
C9orf78-201ENST00000372447 GRIK3Q13003 919 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 ZBTB6Q15916 424 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 EFCAB13Q8IY85 973 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 CTNNBL1Q8WYA6 563 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-201ENST00000372447 SHC3Q92529 594 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 PACSIN2Q9UNF0 486 aaPredicted RBP17.1■□□□□ 0.33
C9orf78-201ENST00000372447 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
C9orf78-201ENST00000372447 NCANO14594 1321 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 CITO14578 2027 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 TRIP11Q15643 1979 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 ARHGEF15O94989 841 aa17.1■□□□□ 0.33
C9orf78-201ENST00000372447 CA3P07451 260 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms