RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 KRT78Q8N1N4 520 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 TCAIMQ8N3R3 496 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 RAB42Q8N4Z0 105 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 SHCBP1Q8NEM2 672 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 EAF2Q96CJ1 260 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-201ENST00000371817 CCDC162PA2VCL2 907 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 UBOX5O94941 541 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 SPRP35270 261 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-201ENST00000371817 UBE3CQ15386 1083 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 ADAM33Q9BZ11 813 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 CCSER1Q9C0I3 900 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 RAB6BQ9NRW1 208 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 ATP9BO43861 1147 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 AKR1B1P15121 316 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 TTKP33981 857 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 CCZ1BP86790 482 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 CCZ1P86791 482 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-201ENST00000371817 ZNF746Q6NUN9 644 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-201ENST00000371817 ZNF554Q86TJ5 538 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 FNIP1Q8TF40 1166 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 VPS33BQ9H267 617 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 C8orf4Q9NR00 106 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 PLEKHG3A1L390 1219 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 PRPF3O43395 683 aaKnown RBP15.9■□□□□ 0.14
COL5A1-201ENST00000371817 BNIP3LO60238 219 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 ATP6V1B2P21281 511 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 XXYLT1Q8NBI6 393 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 KCNMA1Q12791 1236 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 CENPLQ8N0S6 344 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-201ENST00000371817 DDX20Q9UHI6 824 aaKnown RBP15.9■□□□□ 0.14
COL5A1-201ENST00000371817 CYP2D7A0A087X1C5 515 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 PSMD14O00487 310 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 JMJD4Q9H9V9 463 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 TMEM165Q9HC07 324 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 MROH7Q68CQ1 1323 aa15.9■□□□□ 0.14
COL5A1-201ENST00000371817 KLHL41O60662 606 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 MAGEA4P43358 317 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 OSTNP61366 133 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ABATP80404 500 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 EFHC2Q5JST6 749 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ZBTB38Q8NAP3 1195 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 GDPD5Q8WTR4 605 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 IRX2Q9BZI1 471 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 PLEKHG2Q9H7P9 1386 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 TEX33O43247 280 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ALDH6A1Q02252 535 aaKnown RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 SLC35G2Q8TBE7 412 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 EFHD2Q96C19 240 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 POLG2Q9UHN1 485 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 TAGLN3Q9UI15 199 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 STAP1Q9ULZ2 295 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ITIH6Q6UXX5 1313 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 M0R2C6 588 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 SH2B2O14492 632 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 FEN1P39748 380 aaKnown RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 STX4Q12846 297 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 RASSF6Q6ZTQ3 369 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 BEST2Q8NFU1 509 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 CITED4Q96RK1 184 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 EPB41L4AQ9HCS5 686 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 USP10Q14694 798 aaKnown RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 KIZQ2M2Z5 673 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ASAP3Q8TDY4 903 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 SH3GLB2Q9NR46 395 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ARHGEF38Q9NXL2 777 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 FHOD1Q9Y613 1164 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 GCLMP48507 274 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 LRRC24Q50LG9 513 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ZNF394Q53GI3 561 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 PMF1Q6P1K2 205 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 WDR93Q6P2C0 686 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 AKAP14Q86UN6 197 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ELMO2Q96JJ3 720 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 FAR2Q96K12 515 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 A0A1W2PP64 1363 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 PRLP01236 227 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 SESN2P58004 480 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 TYW3Q6IPR3 259 aaKnown RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ZKSCAN4Q969J2 545 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 C9orf72Q96LT7 481 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ING3Q9NXR8 418 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ATXN10Q9UBB4 475 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 GHRP10912 638 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 TFE3P19532 575 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-201ENST00000371817 FASP25445 335 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 ARHGEF19Q8IW93 802 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 GRIP2Q9C0E4 1043 aa15.89■□□□□ 0.13
COL5A1-201ENST00000371817 VAMP7P51809 220 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 KNOP1Q1ED39 458 aaKnown RBP15.88■□□□□ 0.13
COL5A1-201ENST00000371817 SENP7Q9BQF6 1050 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 FUT8Q9BYC5 575 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 NUAK2Q9H093 628 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 FKBP14Q9NWM8 211 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 SMARCAL1Q9NZC9 954 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 SUPT3HB4E1H0 165 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 CENPAP49450 140 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 IL5RAQ01344 420 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 COMMD3-BMI1R4GMX3 469 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 LAMC3Q9Y6N6 1575 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 POLBP06746 335 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms