RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 KPNA7A9QM74 516 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 PPEF2O14830 753 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 ZNF263O14978 683 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 PPP6R2O75170 966 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 VNN2O95498 520 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 OR4Q2P0C623 313 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 IDEP14735 1019 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 CDC25CP30307 473 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 ADSSP30520 456 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 STK38Q15208 465 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 TEAD2Q15562 447 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 CRELD2Q6UXH1 353 aaPredicted RBP17.42■□□□□ 0.38
VMA21-202ENST00000370361 DNAJB7Q7Z6W7 309 aaPredicted RBP17.42■□□□□ 0.38
VMA21-202ENST00000370361 YAF2Q8IY57 180 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 HS6ST3Q8IZP7 471 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 LRRC52Q8N7C0 313 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 ST13P5Q8NFI4 369 aaPredicted RBP17.42■□□□□ 0.38
VMA21-202ENST00000370361 SHKBP1Q8TBC3 707 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 SNX21Q969T3 373 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 CLIC6Q96NY7 704 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 USP28Q96RU2 1077 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 PYM1Q9BRP8 204 aaKnown RBP17.42■□□□□ 0.38
VMA21-202ENST00000370361 LRRC3Q9BY71 257 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 DNAJC25Q9H1X3 360 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 C8orf33Q9H7E9 229 aaPredicted RBP17.42■□□□□ 0.38
VMA21-202ENST00000370361 MAGEF1Q9HAY2 307 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 ZNF334Q9HCZ1 680 aaPredicted RBP17.42■□□□□ 0.38
VMA21-202ENST00000370361 HEBP1Q9NRV9 189 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 PANK4Q9NVE7 773 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 ITGA11Q9UKX5 1188 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 PATJQ8NI35 1801 aa17.42■□□□□ 0.38
VMA21-202ENST00000370361 CFAP54Q96N23 3096 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 CHADO15335 359 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 EXTL3O43909 919 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 KINO60870 393 aaKnown RBP17.41■□□□□ 0.38
VMA21-202ENST00000370361 YEATS4O95619 227 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 GDI1P31150 447 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 TSPY1Q01534 308 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
VMA21-202ENST00000370361 FCHO2Q0JRZ9 810 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 SURF1Q15526 300 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 NFE2Q16621 373 aaPredicted RBP17.41■□□□□ 0.38
VMA21-202ENST00000370361 VITQ6UXI7 678 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 TMEM86AQ8N2M4 240 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 ATAD1Q8NBU5 361 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 LINC00301Q8NCQ3 95 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 OR10T2Q8NGX3 314 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 KCNG4Q8TDN1 519 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 LEO1Q8WVC0 666 aaPredicted RBP17.41■□□□□ 0.38
VMA21-202ENST00000370361 FAM213AQ9BRX8 229 aa17.41■□□□□ 0.38
VMA21-202ENST00000370361 RBAKQ9NYW8 714 aaPredicted RBP17.41■□□□□ 0.38
VMA21-202ENST00000370361 SCN1AP35498 2009 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 A0A1W2PRU2 124 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 HEPACAM2A8MVW5 462 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 TISP43B9A030 160 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 DPYSL4O14531 572 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 SPTLC2O15270 562 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 DDX6P26196 483 aaKnown RBP eCLIP17.4■□□□□ 0.38
VMA21-202ENST00000370361 TARSP26639 723 aaKnown RBP17.4■□□□□ 0.38
VMA21-202ENST00000370361 PLCB2Q00722 1185 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 GRM2Q14416 872 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 TAF12Q16514 161 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 SLC39A12Q504Y0 691 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 ARHGAP29Q52LW3 1261 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 CNNM4Q6P4Q7 775 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 EFCAB13Q8IY85 973 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 CSGALNACT1Q8TDX6 532 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 ZSWIM3Q96MP5 696 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 CRISPLD1Q9H336 500 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 KIAA1586Q9HCI6 787 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 ABCB6Q9NP58 842 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 R3HCC1Q9Y3T6 440 aaKnown RBP17.4■□□□□ 0.38
VMA21-202ENST00000370361 TCHHQ07283 1943 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 CACNA1IQ9P0X4 2223 aa17.4■□□□□ 0.38
VMA21-202ENST00000370361 NUP210Q8TEM1 1887 aaPredicted RBP17.39■□□□□ 0.38
VMA21-202ENST00000370361 EIF3DO15371 548 aaKnown RBP eCLIP17.39■□□□□ 0.37
VMA21-202ENST00000370361 NRLP54845 237 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 SNRPFP62306 86 aaKnown RBP17.39■□□□□ 0.37
VMA21-202ENST00000370361 TFAMQ00059 246 aaKnown RBP17.39■□□□□ 0.37
VMA21-202ENST00000370361 MGAT5BQ3V5L5 792 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 ATL3Q6DD88 541 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 FAM173BQ6P4H8 233 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 POTEHQ6S545 545 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 GPD1LQ8N335 351 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 IQUBQ8NA54 791 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 FAM200AQ8TCP9 573 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 ATRIPQ8WXE1 791 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 SEPT5Q99719 369 aaPredicted RBP17.39■□□□□ 0.37
VMA21-202ENST00000370361 ACBD6Q9BR61 282 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 CHRDQ9H2X0 955 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 ATXN3LQ9H3M9 355 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 TASP1Q9H6P5 420 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 PRMT8Q9NR22 394 aaPredicted RBP17.39■□□□□ 0.37
VMA21-202ENST00000370361 KBTBD4Q9NVX7 518 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 ZSCAN32Q9NX65 697 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 GDAP2Q9NXN4 497 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 SLC27A5Q9Y2P5 690 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 MTF2Q9Y483 593 aaPredicted RBP17.39■□□□□ 0.37
VMA21-202ENST00000370361 PCDHB5Q9Y5E4 795 aa17.39■□□□□ 0.37
VMA21-202ENST00000370361 PIAS3Q9Y6X2 628 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms