RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 TACC1O75410 805 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 VNN1O95497 513 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 ASS1P00966 412 aaKnown RBP14.75□□□□□ -0.05
SSR4-202ENST00000370085 EEF1GP26641 437 aaKnown RBP14.75□□□□□ -0.05
SSR4-202ENST00000370085 GTF2F1P35269 517 aaKnown RBP eCLIP14.75□□□□□ -0.05
SSR4-202ENST00000370085 FMO5P49326 533 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 KCNH2Q12809 1159 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 PUS10Q3MIT2 529 aaKnown RBP14.75□□□□□ -0.05
SSR4-202ENST00000370085 ANO6Q4KMQ2 910 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 CCDC149Q6ZUS6 474 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 TTC39CQ8N584 583 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 ZNF461Q8TAF7 563 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 TAS1R2Q8TE23 839 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 L1RE1Q9UN81 338 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 MTCL1Q9Y4B5 1905 aaKnown RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 BECN2A8MW95 431 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 PES1O00541 588 aaKnown RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 TGM5O43548 720 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 TBC1D4O60343 1298 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 KCNA5P22460 613 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 TPM4P67936 248 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 NOP14P78316 857 aaKnown RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 ROR1Q01973 937 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 MAPRE1Q15691 268 aaKnown RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 MAN2A1Q16706 1144 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 SOWAHAQ2M3V2 549 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 UVSSAQ2YD98 709 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 ZSCAN23Q3MJ62 389 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 CES5AQ6NT32 575 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 C11orf57Q6ZUT1 292 aaPredicted RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 KREMEN2Q8NCW0 462 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 C2orf15Q8WU43 125 aaKnown RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 SLC22A17Q8WUG5 538 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 BPIFA3Q9BQP9 254 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 ACBD6Q9BR61 282 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 XYLT2Q9H1B5 865 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 FAM124BQ9H5Z6 455 aaPredicted RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 SFXN1Q9H9B4 322 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 MAN1C1Q9NR34 630 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 DDX43Q9NXZ2 648 aaKnown RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 AFF4Q9UHB7 1163 aaKnown RBP14.74□□□□□ -0.05
SSR4-202ENST00000370085 CD207Q9UJ71 328 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 COQ4Q9Y3A0 265 aa14.74□□□□□ -0.05
SSR4-202ENST00000370085 COL6A3P12111 3177 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 KCNJ18B7U540 433 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 PRRG1O14668 218 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 LINC01565O15544 149 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 ATF2P15336 505 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 EPCAMP16422 314 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 CDK11BP21127 795 aaKnown RBP14.73□□□□□ -0.05
SSR4-202ENST00000370085 WARSP23381 471 aaKnown RBP14.73□□□□□ -0.05
SSR4-202ENST00000370085 GNL1P36915 607 aaPredicted RBP14.73□□□□□ -0.05
SSR4-202ENST00000370085 ZNF165P49910 485 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 YWHAEP62258 255 aaKnown RBP14.73□□□□□ -0.05
SSR4-202ENST00000370085 ITIH3Q06033 890 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 GPR17Q13304 367 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 KCNC3Q14003 757 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 KCNJ12Q14500 433 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 NFE2Q16621 373 aaPredicted RBP14.73□□□□□ -0.05
SSR4-202ENST00000370085 CBWD6Q4V339 395 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 CBWD3Q5JTY5 395 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 CBWD5Q5RIA9 395 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 ANKRD54Q6NXT1 300 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 CYP26C1Q6V0L0 522 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 OR6B3Q8NGW1 331 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 ATXN2LQ8WWM7 1075 aaKnown RBP14.73□□□□□ -0.05
SSR4-202ENST00000370085 MED15Q96RN5 788 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 NIF3L1Q9GZT8 377 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 CYP3A43Q9HB55 503 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 ZDHHC7Q9NXF8 308 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 CDH9Q9ULB4 789 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 BARX2Q9UMQ3 279 aaPredicted RBP14.73□□□□□ -0.05
SSR4-202ENST00000370085 TSC2P49815 1807 aa14.73□□□□□ -0.05
SSR4-202ENST00000370085 REV3LO60673 3130 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 EYSQ5T1H1 3165 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 A8MXQ7 604 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 XYLBO75191 536 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 ABLIM3O94929 683 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 GLP2RO95838 553 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 HNRNPA1P09651 372 aaKnown RBP eCLIP14.72□□□□□ -0.05
SSR4-202ENST00000370085 TBXAS1P24557 533 aaPredicted RBP14.72□□□□□ -0.05
SSR4-202ENST00000370085 MRPS5P82675 430 aaKnown RBP14.72□□□□□ -0.05
SSR4-202ENST00000370085 TCP11X2Q5H9J9 407 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 PPM1LQ5SGD2 360 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 LILRA6Q6PI73 481 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 SCARA5Q6ZMJ2 495 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 LIMS2Q7Z4I7 341 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 ELMOD1Q8N336 334 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 TNIP3Q96KP6 325 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 FAM81BQ96LP2 452 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 TUBGCP2Q9BSJ2 902 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 ZCWPW1Q9H0M4 648 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 SAMSN1Q9NSI8 373 aaKnown RBP14.72□□□□□ -0.05
SSR4-202ENST00000370085 FBXW11Q9UKB1 542 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 PLXNA3P51805 1871 aa14.72□□□□□ -0.05
SSR4-202ENST00000370085 PRUNE2Q8WUY3 3088 aa14.71□□□□□ -0.05
SSR4-202ENST00000370085 WDR27A2RRH5 827 aa14.71□□□□□ -0.05
SSR4-202ENST00000370085 H3BQ06 376 aaPredicted RBP14.71□□□□□ -0.05
SSR4-202ENST00000370085 GABRDO14764 452 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms