RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GCNT4Q9P109 453 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 GABRDO14764 452 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 TBC1D4O60343 1298 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 CNPP09543 421 aaKnown RBP16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 WARSP23381 471 aaKnown RBP16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 TBXAS1P24557 533 aaPredicted RBP16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 ASPAP45381 313 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 FILIP1LQ4L180 1135 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 SPOPLQ6IQ16 392 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 BCO2Q9BYV7 579 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 TLE6Q9H808 572 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 FBXL5Q9UKA1 691 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 PCDHGC5Q9Y5F6 944 aa16.64■□□□□ 0.25
PRPF38B-202ENST00000370022 CHD7Q9P2D1 2997 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 LGALS16A8MUM7 142 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 TEX28O15482 410 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 NCK2O43639 380 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 LRRN2O75325 713 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 KLRC2P26717 231 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 PCSK1P29120 753 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 DUSP6Q16828 381 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 APTXQ7Z2E3 356 aaKnown RBP16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 KBTBD7Q8WVZ9 684 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 CLSTN3Q9BQT9 956 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 ACBD6Q9BR61 282 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 INTS2Q9H0H0 1204 aaKnown RBP16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 SNX25Q9H3E2 840 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 DDX43Q9NXZ2 648 aaKnown RBP16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 POLIQ9UNA4 740 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 CDY1Q9Y6F8 540 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 VWA8A3KMH1 1905 aa16.63■□□□□ 0.25
PRPF38B-202ENST00000370022 SERPINC1P01008 464 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 GCNT1Q02742 428 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 RAB33AQ14088 237 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 TCEAL5Q5H9L2 206 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 SMYD5Q6GMV2 418 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 TRIM65Q6PJ69 517 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 DNAI2Q9GZS0 605 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 SMYD3Q9H7B4 428 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 DPP7Q9UHL4 492 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
PRPF38B-202ENST00000370022 CLASP2O75122 1294 aaKnown RBP16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 RPL17P18621 184 aaKnown RBP16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 TRIM21P19474 475 aaKnown RBP16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 PON1P27169 355 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 OR1D2P34982 312 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 GNL1P36915 607 aaPredicted RBP16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 NRIP1P48552 1158 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 YWHAEP62258 255 aaKnown RBP16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 INCA1Q0VD86 236 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 SMARCB1Q12824 385 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 CUL2Q13617 745 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 SCARA5Q6ZMJ2 495 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 ENOSF1Q7L5Y1 443 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 ADGRD2Q7Z7M1 963 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 UNC93AQ86WB7 457 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 OR6B3Q8NGW1 331 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 TATDN2Q93075 761 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 JAKMIP2Q96AA8 810 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 MRPL45Q9BRJ2 306 aaKnown RBP16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 CRACR2AQ9BSW2 395 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 MAFFQ9ULX9 164 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 TSC2P49815 1807 aa16.61■□□□□ 0.25
PRPF38B-202ENST00000370022 SRGAP2BP0DMP2 458 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 SLC9A1P19634 815 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 CLCN4P51793 760 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 TSPY1Q01534 308 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 LRMPQ12912 555 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 TPGS2Q68CL5 300 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 ELMSAN1Q6PJG2 1045 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 RSPO2Q6UXX9 243 aaPredicted RBP16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 RBM23Q86U06 439 aaKnown RBP16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 DCP1BQ8IZD4 617 aaKnown RBP16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 PPM1KQ8N3J5 372 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 RNF214Q8ND24 703 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 ZNF461Q8TAF7 563 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 RTP3Q9BQQ7 232 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 ZCWPW1Q9H0M4 648 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 APEX2Q9UBZ4 518 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 CDH9Q9ULB4 789 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 BARX2Q9UMQ3 279 aaPredicted RBP16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 A0A1B0GTH6 734 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 A8MXQ7 604 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 PER2O15055 1255 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 GLUD1P00367 558 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 WEE2P0C1S8 567 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 CPB1P15086 417 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 RFX1P22670 979 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 CDH8P55286 799 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 FANCCQ00597 558 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 ROR1Q01973 937 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 UBXN1Q04323 297 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 HYAL1Q12794 435 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 GPR17Q13304 367 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 MAPRE1Q15691 268 aaKnown RBP16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 PHLDB3Q6NSJ2 640 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 OSTM1Q86WC4 334 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms