RNA–Protein interactions for RNA: ENST00000369968.6

CLCC1-204, Transcript of chloride channel CLIC like 1, humanhuman

TSL 5 BASIC

Gene CLCC1, Length 4,151 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-204ENST00000369968 VCX3AQ9NNX9 186 aa6.66□□□□□ -1.34
CLCC1-204ENST00000369968 DDX18Q9NVP1 670 aaKnown RBP6.66□□□□□ -1.34
CLCC1-204ENST00000369968 NRXN2Q9P2S2 1712 aa6.66□□□□□ -1.34
CLCC1-204ENST00000369968 A8MXQ7 604 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 H3BSA7 217 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 TMEM253P0C7T8 217 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 PCP11498 1178 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 RRM1P23921 792 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 VCPP55072 806 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 CDKL1Q00532 357 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 CDR2Q01850 454 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 DCAF6Q58WW2 860 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 MFSD4BQ5TF39 518 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 KYAT3Q6YP21 454 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 B3GNT6Q6ZMB0 384 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 CALML4Q96GE6 196 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 ABHD8Q96I13 439 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 ZNF778Q96MU6 729 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 FNBP1Q96RU3 617 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 NMUR2Q9GZQ4 415 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 LIN28AQ9H9Z2 209 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 CD209Q9NNX6 404 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 NCKIPSDQ9NZQ3 722 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 WHRNQ9P202 907 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 R3HDM2Q9Y2K5 976 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 RNF11Q9Y3C5 154 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 ZNF646O15015 1829 aaPredicted RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 ARHGAP33O14559 1287 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 CYP26A1O43174 497 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 NDUFB5O43674 189 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 RSL1D1O76021 490 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 TM7SF2O76062 418 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 SERPINB3P29508 390 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 MCCD1P59942 119 aaPredicted RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 ZYXQ15942 572 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 PKN2Q16513 984 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 SHROOM1Q2M3G4 852 aaPredicted RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 HYIQ5T013 277 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 INTS5Q6P9B9 1019 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 LRRC8BQ6P9F7 803 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 CCDC137Q6PK04 289 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 PEX26Q7Z412 305 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 CABP7Q86V35 215 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 PDCD7Q8N8D1 485 aaKnown RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 SLC35C1Q96A29 364 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 ZNF653Q96CK0 615 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 CCDC17Q96LX7 622 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 NAP1L3Q99457 506 aaPredicted RBP6.65□□□□□ -1.34
CLCC1-204ENST00000369968 HGH1Q9BTY7 390 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 GPAMQ9HCL2 828 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 UBN1Q9NPG3 1134 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.65□□□□□ -1.342e-12■■■■■ 97.8
CLCC1-204ENST00000369968 PPME1Q9Y570 386 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 ASTN1O14525 1302 aa6.65□□□□□ -1.34
CLCC1-204ENST00000369968 C15orf38-AP3S2A0A0A6YYH1 394 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 FAM47DPA6NHR8 397 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 CHRNA3P32297 505 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 MLLT10P55197 1068 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 RPL26P61254 145 aaKnown RBP6.65□□□□□ -1.35
CLCC1-204ENST00000369968 ARID5AQ03989 594 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 KCNH2Q12809 1159 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 SNRNP48Q6IEG0 339 aaKnown RBP6.65□□□□□ -1.35
CLCC1-204ENST00000369968 TRIM67Q6ZTA4 783 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 NET1Q7Z628 596 aaPredicted RBP6.65□□□□□ -1.35
CLCC1-204ENST00000369968 ARPINQ7Z6K5 226 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 ALYREFQ86V81 257 aaKnown RBP6.65□□□□□ -1.35
CLCC1-204ENST00000369968 SFR1Q86XK3 245 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 ULK2Q8IYT8 1036 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 HAS1Q92839 578 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 DYDC2Q96IM9 177 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 GBP5Q96PP8 586 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 CGREF1Q99674 301 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 ZSWIM1Q9BR11 485 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 DCLK3Q9C098 648 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 AS3MTQ9HBK9 375 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 CHST7Q9NS84 486 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 CLRN2A0PK11 232 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 EML1O00423 815 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 MAPK13O15264 365 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 FKBP6O75344 327 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 DDAH1O94760 285 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 CD247P20963 164 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 CHRNA5P30532 468 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 RCVRNP35243 200 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 CCR3P51677 355 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 HIRAP54198 1017 aaPredicted RBP6.65□□□□□ -1.35
CLCC1-204ENST00000369968 MTTPP55157 894 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 GPX6P59796 221 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 COASYQ13057 564 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 SUPT20HL1Q3ZLR7 823 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 TEX44Q53QW1 395 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 TDRD12Q587J7 1177 aaKnown RBP6.65□□□□□ -1.35
CLCC1-204ENST00000369968 C11orf63Q6NUN7 778 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 DCDC5Q6ZRR9 648 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 TAOK1Q7L7X3 1001 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 SRRM1Q8IYB3 904 aaKnown RBP6.65□□□□□ -1.35
CLCC1-204ENST00000369968 GLT8D2Q9H1C3 349 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 S100A14Q9HCY8 104 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 RIC8AQ9NPQ8 531 aa6.65□□□□□ -1.35
CLCC1-204ENST00000369968 SH3GLB2Q9NR46 395 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms