RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CD302Q8IX05 232 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 C12orf76Q8N812 135 aaPredicted RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 POMGNT1Q8WZA1 660 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 EDAQ92838 391 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 EEF2KMTQ96G04 330 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 NLRP4Q96MN2 994 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 EIF3CQ99613 913 aaKnown RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 KIFC3Q9BVG8 833 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 STK33Q9BYT3 514 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 ASB7Q9H672 318 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 SIX2Q9NPC8 291 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 SPG21Q9NZD8 308 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 APEX2Q9UBZ4 518 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 PUF60Q9UHX1 559 aaKnown RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 CPSF3Q9UKF6 684 aaKnown RBP9.46□□□□□ -0.9
SNX27-201ENST00000368838 PYCARDQ9ULZ3 195 aa9.46□□□□□ -0.9
SNX27-201ENST00000368838 DOCK8Q8NF50 2099 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 TMEM221A6NGB7 291 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 M0R296 226 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 HOXA2O43364 376 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 CCDC175P0C221 793 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 CYP2J2P51589 502 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 BCAR1P56945 870 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 KRT83P78385 493 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 PLCB3Q01970 1234 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 GCNT1Q02742 428 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 KRT17Q04695 432 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 PPP3CAQ08209 521 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 PRPF4BQ13523 1007 aaKnown RBP9.45□□□□□ -0.9
SNX27-201ENST00000368838 CBX2Q14781 532 aaPredicted RBP9.45□□□□□ -0.9
SNX27-201ENST00000368838 C10orf76Q5T2E6 689 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 HGSNATQ68CP4 663 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 TRIM67Q6ZTA4 783 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 ZNF598Q86UK7 904 aaKnown RBP9.45□□□□□ -0.9
SNX27-201ENST00000368838 CBWD2Q8IUF1 395 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 WDR49Q8IV35 697 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 SLC39A11Q8N1S5 342 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 TXLNBQ8N3L3 684 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 PLEKHO2Q8TD55 490 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 BCL7CQ8WUZ0 217 aaPredicted RBP9.45□□□□□ -0.9
SNX27-201ENST00000368838 TAF4BQ92750 862 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 PBXIP1Q96AQ6 731 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 TARS2Q9BW92 718 aaKnown RBP9.45□□□□□ -0.9
SNX27-201ENST00000368838 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
SNX27-201ENST00000368838 GCOM2Q9BZD3 368 aaPredicted RBP9.45□□□□□ -0.9
SNX27-201ENST00000368838 SMOC2Q9H3U7 446 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 MMRN2Q9H8L6 949 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 AGPAT5Q9NUQ2 364 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 MYO1AQ9UBC5 1043 aa9.45□□□□□ -0.9
SNX27-201ENST00000368838 PIN4Q9Y237 131 aaKnown RBP9.45□□□□□ -0.9
SNX27-201ENST00000368838 EPN1Q9Y6I3 576 aaPredicted RBP9.45□□□□□ -0.9
SNX27-201ENST00000368838 A0A0U1RQF3 1178 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 LRRIQ3A6PVS8 624 aaPredicted RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 PES1O00541 588 aaKnown RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 B4GALT3O60512 393 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 CLASP2O75122 1294 aaKnown RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 IL18RAPO95256 599 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 NDUFA10O95299 355 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 STAU1O95793 577 aaKnown RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 PDGFBP01127 241 aaPredicted RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 C4BPAP04003 597 aaKnown RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 SERPING1P05155 500 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 CLTAP09496 248 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 SRGAP2CP0DJJ0 459 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 FERP16591 822 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 CYLC1P35663 651 aaPredicted RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 MXI1P50539 228 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 TERF1P54274 439 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 ZXDAP98168 799 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 VAC14Q08AM6 782 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 KCNC3Q14003 757 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 DCAF4L1Q3SXM0 396 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 CBWD6Q4V339 395 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 CBWD3Q5JTY5 395 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 CBWD5Q5RIA9 395 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 RARS2Q5T160 578 aaKnown RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 ATF7IP2Q5U623 682 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 SV2AQ7L0J3 742 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 CATSPER4Q7RTX7 472 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 CACNA2D4Q7Z3S7 1137 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 IRF2BP2Q7Z5L9 587 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 ZBTB33Q86T24 672 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 CREBRFQ8IUR6 639 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 FBXL13Q8NEE6 735 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 PRSS33Q8NF86 280 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 SUSD6Q92537 303 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 BICD1Q96G01 975 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 ZNF830Q96NB3 372 aaPredicted RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 MSTO1Q9BUK6 570 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 HAPLN2Q9GZV7 340 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 S1PR5Q9H228 398 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 HAUS4Q9H6D7 363 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 PLEKHA5Q9HAU0 1116 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 FAM207AQ9NSI2 230 aaPredicted RBP9.44□□□□□ -0.9
SNX27-201ENST00000368838 TBC1D13Q9NVG8 400 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 GCNT4Q9P109 453 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 DNAJB4Q9UDY4 337 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms