RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FAM126AQ9BYI3 521 aaPredicted RBP17.34■□□□□ 0.37
CKS1B-202ENST00000368436 ZCWPW1Q9H0M4 648 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 AGO2Q9UKV8 859 aaKnown RBP17.34■□□□□ 0.37
CKS1B-202ENST00000368436 DSEQ9UL01 958 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 CLIC4Q9Y696 253 aa17.34■□□□□ 0.37
CKS1B-202ENST00000368436 CHADO15335 359 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 PPP1R37O75864 691 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 FGF19O95750 216 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 TDGF1P13385 188 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 TUFMP49411 452 aaKnown RBP17.33■□□□□ 0.36
CKS1B-202ENST00000368436 STXBP5Q5T5C0 1151 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 ARID3BQ8IVW6 561 aaPredicted RBP17.33■□□□□ 0.36
CKS1B-202ENST00000368436 HINFPQ9BQA5 517 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 EPC1Q9H2F5 836 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 IKZF4Q9H2S9 585 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 SLITRK6Q9H5Y7 841 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 LMAN1LQ9HAT1 526 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 DPP3Q9NY33 737 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 STK17AQ9UEE5 414 aa17.33■□□□□ 0.36
CKS1B-202ENST00000368436 FBXO2Q9UK22 296 aaPredicted RBP17.33■□□□□ 0.36
CKS1B-202ENST00000368436 SRPRBQ9Y5M8 271 aaKnown RBP17.33■□□□□ 0.36
CKS1B-202ENST00000368436 CYB561D2O14569 222 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 SOAT2O75908 522 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 CHRNB1P11230 501 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 WEE1P30291 646 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 ADSSP30520 456 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 TAF6P49848 677 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 DYMQ7RTS9 669 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 ITIH5Q86UX2 942 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 SFR1Q86XK3 245 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 NT5DC4Q86YG4 428 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 YAF2Q8IY57 180 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 MSANTD3Q96H12 275 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 LRRC3BQ96PB8 259 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 SEL1LQ9UBV2 794 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 CCDC39Q9UFE4 941 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 CACNA1AO00555 2505 aa17.32■□□□□ 0.36
CKS1B-202ENST00000368436 KIF26AQ9ULI4 1882 aaPredicted RBP17.31■□□□□ 0.36
CKS1B-202ENST00000368436 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
CKS1B-202ENST00000368436 MYMKA6NI61 221 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 PDCP20941 246 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 CCNE1P24864 410 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 GABRR2P28476 465 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 SMARCB1Q12824 385 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 POSTNQ15063 836 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 SLC39A12Q504Y0 691 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 C1orf228Q6PIY5 440 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 METTL23Q86XA0 190 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 EFCAB13Q8IY85 973 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 THEM5Q8N1Q8 247 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 CSGALNACT1Q8TDX6 532 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 C2orf15Q8WU43 125 aaKnown RBP17.31■□□□□ 0.36
CKS1B-202ENST00000368436 POMGNT1Q8WZA1 660 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 DNAJC19Q96DA6 116 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 PYM1Q9BRP8 204 aaKnown RBP17.31■□□□□ 0.36
CKS1B-202ENST00000368436 ATXN3LQ9H3M9 355 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 C8orf33Q9H7E9 229 aaPredicted RBP17.31■□□□□ 0.36
CKS1B-202ENST00000368436 OBP2AQ9NY56 170 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 OBSL1O75147 1896 aa17.31■□□□□ 0.36
CKS1B-202ENST00000368436 GPR179Q6PRD1 2367 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 IL18RAPO95256 599 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 GAP43P17677 238 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 ATF6P18850 670 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 NRLP54845 237 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 RESTQ13127 1097 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 ARHGAP29Q52LW3 1261 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 ARHGAP15Q53QZ3 475 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 GPR158Q5T848 1215 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 RRAGBQ5VZM2 374 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 LRRTM3Q86VH5 581 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 GPIHBP1Q8IV16 184 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 SPPL2BQ8TCT7 592 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 LPIN3Q9BQK8 851 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 TASP1Q9H6P5 420 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 IL21Q9HBE4 155 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 NCDNQ9UBB6 729 aa17.3■□□□□ 0.36
CKS1B-202ENST00000368436 SMG5Q9UPR3 1016 aaKnown RBP17.3■□□□□ 0.36
CKS1B-202ENST00000368436 KPNA7A9QM74 516 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 HAPLN1P10915 354 aaPredicted RBP17.29■□□□□ 0.36
CKS1B-202ENST00000368436 CCR3P51677 355 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 KCNA1Q09470 495 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 GAS6Q14393 721 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 PUM1Q14671 1186 aaKnown RBP eCLIP17.29■□□□□ 0.36
CKS1B-202ENST00000368436 PPP2R5DQ14738 602 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 VEPH1Q14D04 833 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 MGAT5BQ3V5L5 792 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 SV2CQ496J9 727 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 L1TD1Q5T7N2 865 aaKnown RBP17.29■□□□□ 0.36
CKS1B-202ENST00000368436 WSCD1Q658N2 575 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 SV2BQ7L1I2 683 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 GPR161Q8N6U8 529 aaKnown RBP17.29■□□□□ 0.36
CKS1B-202ENST00000368436 FAM200AQ8TCP9 573 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 CLIC6Q96NY7 704 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 SEPT5Q99719 369 aaPredicted RBP17.29■□□□□ 0.36
CKS1B-202ENST00000368436 MRPL44Q9H9J2 332 aaKnown RBP17.29■□□□□ 0.36
CKS1B-202ENST00000368436 DLL3Q9NYJ7 618 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 EXOC7Q9UPT5 735 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 MORC2Q9Y6X9 1032 aaPredicted RBP17.29■□□□□ 0.36
CKS1B-202ENST00000368436 DMXL1Q9Y485 3027 aa17.29■□□□□ 0.36
CKS1B-202ENST00000368436 ZNF638Q14966 1978 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms