RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 MAML1Q92585 1016 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 CFAP36Q96G28 342 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 MSTO1Q9BUK6 570 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 ZNF395Q9H8N7 513 aaPredicted RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 AGO4Q9HCK5 861 aaKnown RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 RBAKQ9NYW8 714 aaPredicted RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 KCND2Q9NZV8 630 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 HERC5Q9UII4 1024 aaKnown RBP9.37□□□□□ -0.91
THBS3-201ENST00000368378 ARL2BPQ9Y2Y0 163 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 NRXN2Q9P2S2 1712 aa9.37□□□□□ -0.91
THBS3-201ENST00000368378 SYNJ2BP-COX16A0A087WUM0 186 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 KLHL33A6NCF5 533 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 CST3P01034 146 aaPredicted RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 CD48P09326 243 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 NUMBP49757 651 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 HMGCS2P54868 508 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 GDF10P55107 478 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 IL9RQ01113 521 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 STRN3Q13033 797 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 QSER1Q2KHR3 1735 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 CLEC16AQ2KHT3 1053 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 TDRD10Q5VZ19 366 aaKnown RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 CGB2Q6NT52 195 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 PIGWQ7Z7B1 504 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 LRRC6Q86X45 466 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 CCDC60Q8IWA6 550 aaPredicted RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 SLC25A41Q8N5S1 370 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 RBBP8NLQ8NC74 664 aaPredicted RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 IFT74Q96LB3 600 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 NUDCD1Q96RS6 583 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 ATXN2Q99700 1313 aaKnown RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 PAGR1Q9BTK6 254 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 TRAIPQ9BWF2 469 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 MTMR12Q9C0I1 747 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 ZCWPW1Q9H0M4 648 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 ACSS2Q9NR19 701 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 COX16Q9P0S2 106 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 GRID1Q9ULK0 1009 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 C5orf60A6NFR6 353 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 SPDYE2BA6NHP3 402 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 TP73O15350 636 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 TOP3BO95985 862 aaKnown RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 SPDYE6P0CI01 402 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 NAT1P18440 290 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 CYP24A1Q07973 514 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 ANKRD22Q5VYY1 191 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 ARMC9Q7Z3E5 817 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 PALM2Q8IXS6 379 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 FAM71DQ8N9W8 422 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 DEPTORQ8TB45 409 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 AGR3Q8TD06 166 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 RIT2Q99578 217 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 RPAP3Q9H6T3 665 aaPredicted RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 TMEM8AQ9HCN3 771 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 RNF146Q9NTX7 359 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 SLC17A7Q9P2U7 560 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 AGO2Q9UKV8 859 aaKnown RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 HEY1Q9Y5J3 304 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 FAM47DPA6NHR8 397 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 K7ERI5 159 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 DHX15O43143 795 aaKnown RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 MGRN1O60291 552 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 FDX1P10109 184 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 RFX1P22670 979 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 PSMC5P62195 406 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 MXRA7P84157 204 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 PRKCEQ02156 737 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 NFX1Q12986 1120 aaKnown RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 PPP2R5DQ14738 602 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 RAB6CQ53S08 254 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 LIN9Q5TKA1 542 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 C1orf228Q6PIY5 440 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 NPNTQ6UXI9 565 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 C3orf62Q6ZUJ4 267 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 TTC7BQ86TV6 843 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 GPD1LQ8N335 351 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 EFCAB3Q8N7B9 438 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 CXorf38Q8TB03 319 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 TRAPPC12Q8WVT3 735 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 PSPC1Q8WXF1 523 aaKnown RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 MIEF2Q96C03 454 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 PPP1R36Q96LQ0 422 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 ZNF570Q96NI8 536 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 MECRQ9BV79 373 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 MRIQ9BWK5 157 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 STRA6Q9BX79 667 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 RAB6CQ9H0N0 254 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 APOBEC3GQ9HC16 384 aaKnown RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 KIAA1586Q9HCI6 787 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 GPATCH2LQ9NWQ4 482 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 NOP53Q9NZM5 478 aaKnown RBP9.36□□□□□ -0.91
THBS3-201ENST00000368378 NUB1Q9Y5A7 615 aa9.36□□□□□ -0.91
THBS3-201ENST00000368378 TCRBV7S3A2A0A539 114 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 WDR64B1ANS9 1081 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 ASAP2O43150 1006 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 CDH16O75309 829 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 PAEPP09466 180 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 ATP2A2P16615 1042 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms