RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 GAS2L3Q86XJ1 694 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 KCNV2Q8TDN2 545 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 CMTM5Q96DZ9 223 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 DMAP1Q9NPF5 467 aaPredicted RBP16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 ZNF229Q9UJW7 825 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 TTC37Q6PGP7 1564 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 VWA5AO00534 786 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 PGK2P07205 417 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 PGM1P36871 562 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 RUBCNQ92622 972 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 ALG13Q9NP73 1137 aaKnown RBP16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 HPS4Q9NQG7 708 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 ESYT3A0FGR9 886 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 CFAP73A6NFT4 308 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 ENO1P06733 434 aaKnown RBP16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 XRRA1Q6P2D8 792 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 LINC00523Q86TU6 105 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 RSAD1Q9HA92 442 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 WWOXQ9NZC7 414 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 PSMC3IPQ9P2W1 217 aaPredicted RBP16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 EXTL3O43909 919 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 SPAG6O75602 509 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 NDUFB10O96000 172 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 PDHA1P08559 390 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 ZNF200P98182 395 aaPredicted RBP16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 RUNX1T1Q06455 604 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 SLC30A5Q8TAD4 765 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 RIN2Q8WYP3 895 aaPredicted RBP16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 VCPKMTQ9H867 229 aa16.4■□□□□ 0.22
NUCKS1-201ENST00000367142 SMAPO00193 183 aa16.39■□□□□ 0.22
NUCKS1-201ENST00000367142 CYTH3O43739 400 aa16.39■□□□□ 0.22
NUCKS1-201ENST00000367142 GUCY1A2P33402 732 aa16.39■□□□□ 0.22
NUCKS1-201ENST00000367142 THPOP40225 353 aa16.39■□□□□ 0.22
NUCKS1-201ENST00000367142 AASDHQ4L235 1098 aaPredicted RBP16.39■□□□□ 0.22
NUCKS1-201ENST00000367142 FAM151AQ8WW52 585 aa16.39■□□□□ 0.22
NUCKS1-201ENST00000367142 DDX28Q9NUL7 540 aaKnown RBP16.39■□□□□ 0.22
NUCKS1-201ENST00000367142 ABI2Q9NYB9 513 aaPredicted RBP16.39■□□□□ 0.22
NUCKS1-201ENST00000367142 TTC26A0AVF1 554 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 SOAT2O75908 522 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 POU4F1Q01851 419 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 SGO1Q5FBB7 561 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 RABGAP1LQ5R372 815 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 IRAK1BP1Q5VVH5 260 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 HHIPL2Q6UWX4 724 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 TRIM69Q86WT6 500 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 TMEM117Q9H0C3 514 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 STX7O15400 261 aaKnown RBP16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 MBL2P11226 248 aaPredicted RBP16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 MRPS31Q92665 395 aaKnown RBP16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 EMILIN2Q9BXX0 1053 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 FMO5P49326 533 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 PCMTD2Q9NV79 361 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 PRR23AA6NEV1 266 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 F8W810 466 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 GMPSP49915 693 aaPredicted RBP16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 BFSP2Q13515 415 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 DNAL1Q4LDG9 190 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 JCADQ9P266 1359 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 F5H5T6 163 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 ITIH2P19823 946 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 DYNC1I2Q13409 638 aaKnown RBP16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 BTNL9Q6UXG8 535 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 FMR1NBQ8N0W7 255 aaPredicted RBP16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 SLC35G2Q8TBE7 412 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 REEP2Q9BRK0 252 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 RPS6KB2Q9UBS0 482 aa16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 UBQLN1Q9UMX0 589 aaKnown RBP16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 PRG3Q9Y2Y8 225 aaPredicted RBP16.39■□□□□ 0.21
NUCKS1-201ENST00000367142 MAP3K4Q9Y6R4 1608 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 C2orf81A6NN90 581 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 VGLL3A8MV65 326 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 GOLGA8RI6L899 631 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 NSUN4Q96CB9 384 aaKnown RBP16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 MYOZ2Q9NPC6 264 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 PSMD14O00487 310 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 ANXA9O76027 345 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 AMPD2Q01433 879 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 DPP7Q9UHL4 492 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 NDUFB5O43674 189 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 CD2BP2O95400 341 aaKnown RBP16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 PNMA6AP0CW24 399 aaPredicted RBP16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 KDSRQ06136 332 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 CCDC142Q17RM4 750 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 TRAPPC11Q7Z392 1133 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 RANBP17Q9H2T7 1088 aaKnown RBP16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 TRMT6Q9UJA5 497 aaKnown RBP16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 IGSF9BQ9UPX0 1349 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 MYO1CO00159 1063 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 TOMM70O94826 608 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 ASS1P00966 412 aaKnown RBP16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 ERVK-10P10266 1014 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 ACADMP11310 421 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 SGMS1Q86VZ5 419 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 TMEM245Q9H330 911 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 GRAP2O75791 330 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 AGTP01019 485 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 ENO3P13929 434 aaPredicted RBP16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 RAD23BP54727 409 aa16.38■□□□□ 0.21
NUCKS1-201ENST00000367142 TTC39BQ5VTQ0 682 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms