RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 PDCL2Q8N4E4 241 aa15.73■□□□□ 0.11
MRPL55-218ENST00000366747 SPPL2BQ8TCT7 592 aa15.73■□□□□ 0.11
MRPL55-218ENST00000366747 SYAP1Q96A49 352 aaPredicted RBP15.73■□□□□ 0.11
MRPL55-218ENST00000366747 ACBD6Q9BR61 282 aa15.73■□□□□ 0.11
MRPL55-218ENST00000366747 VRTNQ9H8Y1 702 aa15.73■□□□□ 0.11
MRPL55-218ENST00000366747 MUTYHQ9UIF7 546 aa15.73■□□□□ 0.11
MRPL55-218ENST00000366747 SORCS3Q9UPU3 1222 aa15.73■□□□□ 0.11
MRPL55-218ENST00000366747 ASB3Q9Y575 518 aa15.73■□□□□ 0.11
MRPL55-218ENST00000366747 SNX9Q9Y5X1 595 aa15.73■□□□□ 0.11
MRPL55-218ENST00000366747 DENND4AQ7Z401 1863 aa15.73■□□□□ 0.11
MRPL55-218ENST00000366747 MTMR11A4FU01 709 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 ZNF197O14709 1029 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 GABRDO14764 452 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 PTPN2P17706 415 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 PSMC2P35998 433 aaKnown RBP15.72■□□□□ 0.11
MRPL55-218ENST00000366747 TUFMP49411 452 aaKnown RBP15.72■□□□□ 0.11
MRPL55-218ENST00000366747 LRRC63Q05C16 580 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 TRPC3Q13507 836 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 MTMR3Q13615 1198 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 PABPC1LQ4VXU2 614 aaKnown RBP15.72■□□□□ 0.11
MRPL55-218ENST00000366747 CEP135Q66GS9 1140 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 LMBRD2Q68DH5 695 aaPredicted RBP15.72■□□□□ 0.11
MRPL55-218ENST00000366747 CENPPQ6IPU0 288 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 FOXR2Q6PJQ5 311 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 RNF19BQ6ZMZ0 732 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 CLEC17AQ6ZS10 378 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 LIMS2Q7Z4I7 341 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 GRASPQ7Z6J2 395 aaPredicted RBP15.72■□□□□ 0.11
MRPL55-218ENST00000366747 OR10T2Q8NGX3 314 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 EDAQ92838 391 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 KHSRPQ92945 711 aaKnown RBP eCLIP15.72■□□□□ 0.11
MRPL55-218ENST00000366747 TSG101Q99816 390 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 GZF1Q9H116 711 aaPredicted RBP15.72■□□□□ 0.11
MRPL55-218ENST00000366747 EPHX3Q9H6B9 360 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 L1RE1Q9UN81 338 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 POLIQ9UNA4 740 aa15.72■□□□□ 0.11
MRPL55-218ENST00000366747 PSMA7O14818 248 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 CETN3O15182 167 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 PHACTR2O75167 634 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 SEC24AO95486 1093 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 KRT13P13646 458 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 GBP2P32456 591 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-218ENST00000366747 ALDH1A3P47895 512 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 MCCD1P59942 119 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-218ENST00000366747 ADAM9Q13443 819 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 TMEM31Q5JXX7 168 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 GET4Q7L5D6 327 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-218ENST00000366747 ADGRF2Q8IZF7 708 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 TAF4BQ92750 862 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 ZNF512Q96ME7 567 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-218ENST00000366747 RTP3Q9BQQ7 232 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 ABCB6Q9NP58 842 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 DDX43Q9NXZ2 648 aaKnown RBP15.71■□□□□ 0.11
MRPL55-218ENST00000366747 DNMT3BQ9UBC3 853 aaKnown RBP15.71■□□□□ 0.11
MRPL55-218ENST00000366747 CDH7Q9ULB5 785 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 MAPK8IP1Q9UQF2 711 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 YIPF1Q9Y548 306 aa15.71■□□□□ 0.11
MRPL55-218ENST00000366747 BDP1A6H8Y1 2624 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 LRRIQ3A6PVS8 624 aaPredicted RBP15.7■□□□□ 0.1
MRPL55-218ENST00000366747 PRR33A8MZF0 331 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 TACC1O75410 805 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 FGF19O95750 216 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 RHOP08100 348 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 OR4Q2P0C623 313 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 LAMP2P13473 410 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 WARSP23381 471 aaKnown RBP15.7■□□□□ 0.1
MRPL55-218ENST00000366747 SP100P23497 879 aaPredicted RBP15.7■□□□□ 0.1
MRPL55-218ENST00000366747 PRCPP42785 496 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 CASP4P49662 377 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 VAMP7P51809 220 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 EPHB3P54753 998 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 EPHA5P54756 1037 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 TNNC1P63316 161 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 ZXDAP98168 799 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 FKBP3Q00688 224 aaKnown RBP15.7■□□□□ 0.1
MRPL55-218ENST00000366747 TWF1Q12792 350 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 BIRC3Q13489 604 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 MAPRE1Q15691 268 aaKnown RBP15.7■□□□□ 0.1
MRPL55-218ENST00000366747 ZACNQ401N2 412 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 INTS6LQ5JSJ4 861 aaKnown RBP15.7■□□□□ 0.1
MRPL55-218ENST00000366747 CYP4A22Q5TCH4 519 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 ITIH5Q86UX2 942 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 FAM186BQ8IYM0 893 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 ADSSL1Q8N142 457 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 TRIML1Q8N9V2 468 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 DHTKD1Q96HY7 919 aaPredicted RBP15.7■□□□□ 0.1
MRPL55-218ENST00000366747 FUBP3Q96I24 572 aaKnown RBP eCLIP15.7■□□□□ 0.1
MRPL55-218ENST00000366747 MYADMQ96S97 322 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 GDE1Q9NZC3 331 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 LIMD1Q9UGP4 676 aa15.7■□□□□ 0.1
MRPL55-218ENST00000366747 MRPS23Q9Y3D9 190 aaKnown RBP15.7■□□□□ 0.1
MRPL55-218ENST00000366747 TSC2P49815 1807 aa15.69■□□□□ 0.1
MRPL55-218ENST00000366747 SCN1AP35498 2009 aa15.69■□□□□ 0.1
MRPL55-218ENST00000366747 SLC16A3O15427 465 aaKnown RBP15.69■□□□□ 0.1
MRPL55-218ENST00000366747 STX10O60499 249 aa15.69■□□□□ 0.1
MRPL55-218ENST00000366747 GADD45BO75293 160 aaPredicted RBP15.69■□□□□ 0.1
MRPL55-218ENST00000366747 AKAP3O75969 853 aa15.69■□□□□ 0.1
MRPL55-218ENST00000366747 VNN2O95498 520 aa15.69■□□□□ 0.1
MRPL55-218ENST00000366747 C4BPAP04003 597 aaKnown RBP15.69■□□□□ 0.1
MRPL55-218ENST00000366747 EPB41P11171 864 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms