RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 GUCY2CP25092 1073 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 UBA7P41226 1012 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 SOX9P48436 509 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 LIMK1P53667 647 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 YWHAHQ04917 246 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-213ENST00000366740 CCINQ13939 588 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 NOLC1Q14978 699 aaKnown RBP eCLIP12.68□□□□□ -0.38
MRPL55-213ENST00000366740 SLC39A14Q15043 492 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 ARHGAP29Q52LW3 1261 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 WDR5BQ86VZ2 330 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 YAF2Q8IY57 180 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 KCTD17Q8N5Z5 321 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 FAM160A2Q8N612 972 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-213ENST00000366740 DDX1Q92499 740 aaKnown RBP12.68□□□□□ -0.38
MRPL55-213ENST00000366740 ZBTB45Q96K62 511 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-213ENST00000366740 NTPCRQ9BSD7 190 aaKnown RBP12.68□□□□□ -0.38
MRPL55-213ENST00000366740 TCHPQ9BT92 498 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 CCSER1Q9C0I3 900 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 SLITRK6Q9H5Y7 841 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 C2orf42Q9NWW7 574 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 OBP2AQ9NY56 170 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 TFIP11Q9UBB9 837 aaKnown RBP12.68□□□□□ -0.38
MRPL55-213ENST00000366740 SRPRBQ9Y5M8 271 aaKnown RBP12.68□□□□□ -0.38
MRPL55-213ENST00000366740 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-213ENST00000366740 ADAMTS9Q9P2N4 1935 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 MYOFQ9NZM1 2061 aa12.68□□□□□ -0.38
MRPL55-213ENST00000366740 ABCA7Q8IZY2 2146 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 SLC16A4O15374 487 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 SLC26A4O43511 780 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 OR4Q2P0C623 313 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 WEE1P30291 646 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 NASPP49321 788 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-213ENST00000366740 KPNA1P52294 538 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-213ENST00000366740 CACNB1Q02641 598 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-213ENST00000366740 GPR17Q13304 367 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 MCM6Q14566 821 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 STXBP5Q5T5C0 1151 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 ZPBP2Q6X784 338 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 GAREM2Q75VX8 874 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 ARID3BQ8IVW6 561 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-213ENST00000366740 TMEM130Q8N3G9 435 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 SYNPOQ8N3V7 929 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 CDK5RAP3Q96JB5 506 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 LRRC3BQ96PB8 259 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 TIPINQ9BVW5 301 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 ASB3Q9Y575 518 aa12.67□□□□□ -0.38
MRPL55-213ENST00000366740 TTC26A0AVF1 554 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 MTMR11A4FU01 709 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 OR6C75A6NL08 312 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 TM4SF5O14894 197 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 HSP90AA1P07900 732 aaKnown RBP12.66□□□□□ -0.38
MRPL55-213ENST00000366740 ZSCAN22P10073 491 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-213ENST00000366740 CXCL8P10145 99 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 HARSP12081 509 aaKnown RBP12.66□□□□□ -0.38
MRPL55-213ENST00000366740 CYP3A5P20815 502 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 PMLP29590 882 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 EPHB3P54753 998 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 MCL1Q07820 350 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 DUSP4Q13115 394 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 MYBPC2Q14324 1141 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 DHX8Q14562 1220 aaKnown RBP12.66□□□□□ -0.38
MRPL55-213ENST00000366740 SEZ6Q53EL9 994 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
MRPL55-213ENST00000366740 CENPPQ6IPU0 288 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 TMEM161BQ8NDZ6 487 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 RAD54LQ92698 747 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 PSMG2Q969U7 264 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 CALML4Q96GE6 196 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 PGLYRP2Q96PD5 576 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 HAPLN2Q9GZV7 340 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 PLEKHA5Q9HAU0 1116 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 GTSE1Q9NYZ3 720 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 HSFX1Q9UBD0 423 aa12.66□□□□□ -0.38
MRPL55-213ENST00000366740 UBQLN1Q9UMX0 589 aaKnown RBP12.66□□□□□ -0.38
MRPL55-213ENST00000366740 TIMM13Q9Y5L4 95 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-213ENST00000366740 MORC2Q9Y6X9 1032 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-213ENST00000366740 MYH10P35580 1976 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 MYO18AQ92614 2054 aaKnown RBP12.65□□□□□ -0.38
MRPL55-213ENST00000366740 A0A087X0B3 334 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 CCDC163A0A0D9SF12 145 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 FGF19O95750 216 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 F13A1P00488 732 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 MAPTP10636 758 aaKnown RBP12.65□□□□□ -0.38
MRPL55-213ENST00000366740 TYMPP19971 482 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 HOXC13P31276 330 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 DDIT3P35638 169 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 RAP1GAPP47736 663 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 ALDH1A3P47895 512 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 STRN3Q13033 797 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 PON2Q15165 354 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 FOXD4L6Q3SYB3 417 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-213ENST00000366740 FOXD4L3Q6VB84 417 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-213ENST00000366740 TTC9BQ8N6N2 239 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 KCNN1Q92952 543 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 LOXL4Q96JB6 756 aa12.65□□□□□ -0.38
MRPL55-213ENST00000366740 ZFYVE19Q96K21 471 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms