RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 RGS2P41220 211 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 TFAP4Q01664 338 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 KLRC3Q07444 240 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 GPR158Q5T848 1215 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 TEPPQ6URK8 271 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 TBC1D10CQ8IV04 446 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 ZNF610Q8N9Z0 462 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 REPS2Q8NFH8 660 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 DIRC2Q96SL1 478 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 MOV10L1Q9BXT6 1211 aaKnown RBP9.01□□□□□ -0.97
YBX3-204ENST00000366290 MS4A5Q9H3V2 200 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 MROH8Q9H579 483 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 NSUN3Q9H649 340 aaKnown RBP9.01□□□□□ -0.97
YBX3-204ENST00000366290 INCENPQ9NQS7 918 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 TCP11L1Q9NUJ3 509 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 KLHL42Q9P2K6 505 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 CLIP2Q9UDT6 1046 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 RBM8AQ9Y5S9 174 aaKnown RBP9.01□□□□□ -0.97
YBX3-204ENST00000366290 PLA2G6O60733 806 aa9□□□□□ -0.97
YBX3-204ENST00000366290 C8AP07357 584 aa9□□□□□ -0.97
YBX3-204ENST00000366290 HAND2P61296 217 aa9□□□□□ -0.97
YBX3-204ENST00000366290 DBPQ10586 325 aaPredicted RBP9□□□□□ -0.97
YBX3-204ENST00000366290 FAPQ12884 760 aa9□□□□□ -0.97
YBX3-204ENST00000366290 LRRC32Q14392 662 aa9□□□□□ -0.97
YBX3-204ENST00000366290 NECTIN1Q15223 517 aa9□□□□□ -0.97
YBX3-204ENST00000366290 CR1LQ2VPA4 569 aa9□□□□□ -0.97
YBX3-204ENST00000366290 FAM47AQ5JRC9 791 aa9□□□□□ -0.97
YBX3-204ENST00000366290 FAM83BQ5T0W9 1011 aa9□□□□□ -0.97
YBX3-204ENST00000366290 AKNAD1Q5T1N1 836 aa9□□□□□ -0.97
YBX3-204ENST00000366290 CD276Q5ZPR3 534 aa9□□□□□ -0.97
YBX3-204ENST00000366290 CASC1Q6TDU7 716 aa9□□□□□ -0.97
YBX3-204ENST00000366290 PRR23BQ6ZRT6 265 aa9□□□□□ -0.97
YBX3-204ENST00000366290 ZZZ3Q8IYH5 903 aa9□□□□□ -0.97
YBX3-204ENST00000366290 ASB15Q8WXK1 588 aa9□□□□□ -0.97
YBX3-204ENST00000366290 TRIB2Q92519 343 aa9□□□□□ -0.97
YBX3-204ENST00000366290 C16orf92Q96LL3 132 aa9□□□□□ -0.97
YBX3-204ENST00000366290 GBP4Q96PP9 640 aa9□□□□□ -0.97
YBX3-204ENST00000366290 SLF1Q9BQI6 1058 aa9□□□□□ -0.97
YBX3-204ENST00000366290 EPB41L4BQ9H329 900 aa9□□□□□ -0.97
YBX3-204ENST00000366290 METTL14Q9HCE5 456 aaKnown RBP9□□□□□ -0.97
YBX3-204ENST00000366290 FBXO28Q9NVF7 368 aa9□□□□□ -0.97
YBX3-204ENST00000366290 SIRT5Q9NXA8 310 aa9□□□□□ -0.97
YBX3-204ENST00000366290 HSPBP1Q9NZL4 362 aa9□□□□□ -0.97
YBX3-204ENST00000366290 TRHDEQ9UKU6 1024 aa9□□□□□ -0.97
YBX3-204ENST00000366290 RPTORQ8N122 1335 aa9□□□□□ -0.97
YBX3-204ENST00000366290 MYOCOSA0A1B0GUC4 107 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 SGPL1O95470 568 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 SLC25A27O95847 323 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 CYP21A2P08686 494 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 CD40P25942 277 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 AOAHP28039 575 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 COPB2P35606 906 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 EPHA7Q15375 998 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 ODR4Q5SWX8 454 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 STOX1Q6ZVD7 989 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 ZC3H18Q86VM9 953 aaKnown RBP8.99□□□□□ -0.97
YBX3-204ENST00000366290 RASSF3Q86WH2 238 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 CCAR1Q8IX12 1150 aaKnown RBP8.99□□□□□ -0.97
YBX3-204ENST00000366290 FAM26EQ8N5C1 309 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 U2AF1L4Q8WU68 220 aaKnown RBP8.99□□□□□ -0.97
YBX3-204ENST00000366290 CPA5Q8WXQ8 436 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 DDX11Q96FC9 970 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 RNF41Q9H4P4 317 aaPredicted RBP8.99□□□□□ -0.97
YBX3-204ENST00000366290 SLC38A10Q9HBR0 1119 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 NGRNQ9NPE2 291 aaKnown RBP8.99□□□□□ -0.97
YBX3-204ENST00000366290 FAM53CQ9NYF3 392 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 FEM1BQ9UK73 627 aa8.99□□□□□ -0.97
YBX3-204ENST00000366290 PLXNA1Q9UIW2 1896 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 ALPK3Q96L96 1907 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 TSPY2A6NKD2 308 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 K7ESF4 209 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 RANBP6O60518 1105 aaKnown RBP8.98□□□□□ -0.97
YBX3-204ENST00000366290 NMT2O60551 498 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 TMEM253P0C7T8 217 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 NCAM1P13591 858 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 ZKSCAN1P17029 563 aaPredicted RBP8.98□□□□□ -0.97
YBX3-204ENST00000366290 CYP2B6P20813 491 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 ADORA2AP29274 412 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 OAZ1P54368 228 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 NKX3-2P78367 333 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 CACNB2Q08289 660 aaPredicted RBP8.98□□□□□ -0.97
YBX3-204ENST00000366290 ZNF648Q5T619 568 aaPredicted RBP8.98□□□□□ -0.97
YBX3-204ENST00000366290 SYDE2Q5VT97 1194 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 SLFN13Q68D06 897 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 CD300LDQ6UXZ3 194 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 MFSD6Q6ZSS7 791 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 ERCC4Q92889 916 aaPredicted RBP8.98□□□□□ -0.97
YBX3-204ENST00000366290 AHCYL2Q96HN2 611 aaKnown RBP8.98□□□□□ -0.97
YBX3-204ENST00000366290 TTC14Q96N46 770 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 NUP88Q99567 741 aaPredicted RBP8.98□□□□□ -0.97
YBX3-204ENST00000366290 SMAD5Q99717 465 aaKnown RBP8.98□□□□□ -0.97
YBX3-204ENST00000366290 MENTQ9BUN1 341 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 TEX13BQ9BXU2 312 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 KRTAP9-9Q9BYP9 154 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 KRTAP9-4Q9BYQ2 154 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 RNF38Q9H0F5 515 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 CNTD2Q9H8S5 307 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 KCNK12Q9HB15 430 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 CTNNA3Q9UI47 895 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 NOC2LQ9Y3T9 749 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms