RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SMYD3Q9H7B4 428 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 NRDE2Q9H7Z3 1164 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 EPOPA6NHQ4 379 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 RFXAPO00287 272 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 SPTLC1O15269 473 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 SERPING1P05155 500 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 WEE2P0C1S8 567 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 ACO1P21399 889 aaKnown RBP22.06■■□□□ 1.12
SHISA4-201ENST00000362011 RAP1GAPP47736 663 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 CDK17Q00537 523 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 TFF2Q03403 129 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 TAP1Q03518 808 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 AAK1Q2M2I8 961 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 TDRD12Q587J7 1177 aaKnown RBP22.06■■□□□ 1.12
SHISA4-201ENST00000362011 DCLRE1AQ6PJP8 1040 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 TMTC1Q8IUR5 882 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 TTC39CQ8N584 583 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 TMEM175Q9BSA9 504 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 SDCBP2Q9H190 292 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 CISHQ9NSE2 258 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 DNAJB4Q9UDY4 337 aa22.06■■□□□ 1.12
SHISA4-201ENST00000362011 B4GALT3O60512 393 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 ARHGEF15O94989 841 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 CD58P19256 250 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 PRKCIP41743 596 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 OR1G1P47890 313 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 KLHL30Q0D2K2 578 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 FAM117BQ6P1L5 589 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 IRF2BP2Q7Z5L9 587 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 C3orf58Q8NDZ4 430 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 RABGGTAQ92696 567 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 ZNF689Q96CS4 500 aaPredicted RBP22.05■■□□□ 1.12
SHISA4-201ENST00000362011 NECAB3Q96P71 396 aaPredicted RBP22.05■■□□□ 1.12
SHISA4-201ENST00000362011 RAPGEFL1Q9UHV5 662 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 CNTN6Q9UQ52 1028 aa22.05■■□□□ 1.12
SHISA4-201ENST00000362011 BZW2Q9Y6E2 419 aaKnown RBP22.05■■□□□ 1.12
SHISA4-201ENST00000362011 TMEM189-UBE2V1I3L0A0 370 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 HUS1O60921 280 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 B3GAT3O94766 335 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 SKILP12757 684 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 CDH8P55286 799 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 TMEM270Q6UE05 265 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 DSTYKQ6XUX3 929 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 DPH6Q7L8W6 267 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 HERC6Q8IVU3 1022 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 CMTR2Q8IYT2 770 aaKnown RBP22.04■■□□□ 1.12
SHISA4-201ENST00000362011 TOP6BLQ8N6T0 577 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 RBBP8NLQ8NC74 664 aaPredicted RBP22.04■■□□□ 1.12
SHISA4-201ENST00000362011 APPL2Q8NEU8 664 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 SENP8Q96LD8 212 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 CHP1Q99653 195 aa22.04■■□□□ 1.12
SHISA4-201ENST00000362011 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.04■■□□□ 1.12
SHISA4-201ENST00000362011 PRRC2BQ5JSZ5 2229 aaKnown RBP22.03■■□□□ 1.12
SHISA4-201ENST00000362011 CYB561D2O14569 222 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 CYP26A1O43174 497 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 KIF4AO95239 1232 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 CLCN1P35523 988 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 AARSP49588 968 aaKnown RBP eCLIP22.03■■□□□ 1.12
SHISA4-201ENST00000362011 KCNQ1P51787 676 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 HGSNATQ68CP4 663 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 TMCO2Q7Z6W1 182 aaPredicted RBP22.03■■□□□ 1.12
SHISA4-201ENST00000362011 MICALL1Q8N3F8 863 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 COLEC11Q9BWP8 271 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 RC3H2Q9HBD1 1191 aaKnown RBP22.03■■□□□ 1.12
SHISA4-201ENST00000362011 ARHGAP20Q9P2F6 1191 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 COG5Q9UP83 839 aa22.03■■□□□ 1.12
SHISA4-201ENST00000362011 SSU72P8A0A1W2PR75 194 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 ARHGEF37A1IGU5 675 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 NRP1O14786 923 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 ARHGAP6O43182 974 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 TACC1O75410 805 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 ALDH2P05091 517 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 IGFBP6P24592 240 aaPredicted RBP22.02■■□□□ 1.12
SHISA4-201ENST00000362011 BPIFB4P59827 614 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 INCA1Q0VD86 236 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 MAPK8IP2Q13387 824 aaPredicted RBP22.02■■□□□ 1.12
SHISA4-201ENST00000362011 SOWAHAQ2M3V2 549 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 CD300LGQ6UXG3 332 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 HASPINQ8TF76 798 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 HAUS4Q9H6D7 363 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 HCSTQ9UBK5 93 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 BARX2Q9UMQ3 279 aaPredicted RBP22.02■■□□□ 1.12
SHISA4-201ENST00000362011 L1RE1Q9UN81 338 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 FAN1Q9Y2M0 1017 aa22.02■■□□□ 1.12
SHISA4-201ENST00000362011 PRG3Q9Y2Y8 225 aaPredicted RBP22.02■■□□□ 1.12
SHISA4-201ENST00000362011 SOWAHDA6NJG2 315 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 LPXNO60711 386 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 CILPO75339 1184 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 PLEKP08567 350 aaPredicted RBP22.01■■□□□ 1.11
SHISA4-201ENST00000362011 FAM163BP0C2L3 166 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 ODC1P11926 461 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 EIF4A3P38919 411 aaKnown RBP22.01■■□□□ 1.11
SHISA4-201ENST00000362011 BRCC3P46736 316 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 SLC11A1P49279 550 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 PDE6CP51160 858 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 ZNF132P52740 706 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 PTK2Q05397 1052 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 BTG3Q14201 252 aaPredicted RBP22.01■■□□□ 1.11
SHISA4-201ENST00000362011 TIGD5Q53EQ6 642 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 LIMS2Q7Z4I7 341 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms