RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 PPP2R3CQ969Q6 453 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 MRPL45Q9BRJ2 306 aaKnown RBP13.48□□□□□ -0.25
CNTF-201ENST00000361987 NIF3L1Q9GZT8 377 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 INTS2Q9H0H0 1204 aaKnown RBP13.48□□□□□ -0.25
CNTF-201ENST00000361987 NSUN3Q9H649 340 aaKnown RBP13.48□□□□□ -0.25
CNTF-201ENST00000361987 IGFLR1Q9H665 355 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.48□□□□□ -0.25
CNTF-201ENST00000361987 CDY1Q9Y6F8 540 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 VWA8A3KMH1 1905 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 FOSL2P15408 326 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 POU3F3P20264 500 aaPredicted RBP13.48□□□□□ -0.25
CNTF-201ENST00000361987 PON1P27169 355 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 OR1D2P34982 312 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 GNL1P36915 607 aaPredicted RBP13.48□□□□□ -0.25
CNTF-201ENST00000361987 ASPAP45381 313 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 LHX1P48742 406 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 CREMQ03060 361 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 FILIP1LQ4L180 1135 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 TRIM65Q6PJ69 517 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 RSPO2Q6UXX9 243 aaPredicted RBP13.48□□□□□ -0.25
CNTF-201ENST00000361987 APTXQ7Z2E3 356 aaKnown RBP13.48□□□□□ -0.25
CNTF-201ENST00000361987 GAS2L3Q86XJ1 694 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 PALB2Q86YC2 1186 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 GPR65Q8IYL9 337 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 PPM1KQ8N3J5 372 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 NT5C1BQ96P26 610 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 KLHL5Q96PQ7 755 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 CLSTN3Q9BQT9 956 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 SNX25Q9H3E2 840 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 DDX43Q9NXZ2 648 aaKnown RBP13.48□□□□□ -0.25
CNTF-201ENST00000361987 MTRRQ9UBK8 725 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 FBXL5Q9UKA1 691 aa13.48□□□□□ -0.25
CNTF-201ENST00000361987 TACC1O75410 805 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 PDGFRBP09619 1106 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 LMO2P25791 158 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 NRIP1P48552 1158 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 CDR1P51861 262 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 FANCCQ00597 558 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 CCDC85BQ15834 202 aaPredicted RBP13.47□□□□□ -0.25
CNTF-201ENST00000361987 TCEAL5Q5H9L2 206 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 RRAGAQ7L523 313 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 LIMS2Q7Z4I7 341 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 KBTBD7Q8WVZ9 684 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 NAP1L5Q96NT1 182 aaPredicted RBP13.47□□□□□ -0.25
CNTF-201ENST00000361987 ARID3AQ99856 593 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 RXFP1Q9HBX9 757 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 FNIP2Q9P278 1114 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 BACE2Q9Y5Z0 518 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 EYSQ5T1H1 3165 aa13.47□□□□□ -0.25
CNTF-201ENST00000361987 LGALS16A8MUM7 142 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 GABRDO14764 452 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 ADAM12O43184 909 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 ADH1AP07327 375 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 CD58P19256 250 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 WARSP23381 471 aaKnown RBP13.46□□□□□ -0.25
CNTF-201ENST00000361987 ACAT1P24752 427 aaKnown RBP13.46□□□□□ -0.25
CNTF-201ENST00000361987 GTF2F1P35269 517 aaKnown RBP eCLIP13.46□□□□□ -0.25
CNTF-201ENST00000361987 NDUFV1P49821 464 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 PLCB2Q00722 1185 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 APBA1Q02410 837 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 KCNMA1Q12791 1236 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 PHLDB3Q6NSJ2 640 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 OSTM1Q86WC4 334 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 PPM1EQ8WY54 764 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 PCMTD1Q96MG8 357 aaPredicted RBP13.46□□□□□ -0.25
CNTF-201ENST00000361987 BCO2Q9BYV7 579 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 SDCBP2Q9H190 292 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 RBSNQ9H1K0 784 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 UBE2TQ9NPD8 197 aaPredicted RBP13.46□□□□□ -0.25
CNTF-201ENST00000361987 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.25
CNTF-201ENST00000361987 COL4A4P53420 1690 aaPredicted RBP13.46□□□□□ -0.25
CNTF-201ENST00000361987 OR6C75A6NL08 312 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 A8MXQ7 604 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 HCRTO43612 131 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 TBC1D4O60343 1298 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 CLASP2O75122 1294 aaKnown RBP13.46□□□□□ -0.26
CNTF-201ENST00000361987 FAM163BP0C2L3 166 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 OR4Q2P0C623 313 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 CPB1P15086 417 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 TBXAS1P24557 533 aaPredicted RBP13.46□□□□□ -0.26
CNTF-201ENST00000361987 UBASH3AP57075 661 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 CUL2Q13617 745 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 SLC8B1Q6J4K2 584 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 ARHGEF19Q8IW93 802 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 OR10T2Q8NGX3 314 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 TMEM209Q96SK2 561 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 RTP3Q9BQQ7 232 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 ACBD6Q9BR61 282 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 OXCT2Q9BYC2 517 aaPredicted RBP13.46□□□□□ -0.26
CNTF-201ENST00000361987 CYP3A43Q9HB55 503 aa13.46□□□□□ -0.26
CNTF-201ENST00000361987 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.26
CNTF-201ENST00000361987 TEX33O43247 280 aa13.45□□□□□ -0.26
CNTF-201ENST00000361987 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
CNTF-201ENST00000361987 PCSK1P29120 753 aa13.45□□□□□ -0.26
CNTF-201ENST00000361987 TSPY1Q01534 308 aa13.45□□□□□ -0.26
CNTF-201ENST00000361987 LLGL2Q6P1M3 1020 aa13.45□□□□□ -0.26
CNTF-201ENST00000361987 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
CNTF-201ENST00000361987 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms