RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 RUSC1Q9BVN2 902 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 TROVE2P10155 538 aaKnown RBP eCLIP20.12■□□□□ 0.81
CMTM3-201ENST00000361909 BFSP1Q12934 665 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 TMED2Q15363 201 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 PHLDB3Q6NSJ2 640 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 XRRA1Q6P2D8 792 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 FASTKD5Q7L8L6 764 aaKnown RBP20.12■□□□□ 0.81
CMTM3-201ENST00000361909 SMC1BQ8NDV3 1235 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 ATL2Q8NHH9 583 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 VCX3BQ9H321 246 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 VCX3AQ9NNX9 186 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 VAV3Q9UKW4 847 aa20.12■□□□□ 0.81
CMTM3-201ENST00000361909 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.12■□□□□ 0.81
CMTM3-201ENST00000361909 CETPP11597 493 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 PSMC6P62333 389 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 FKBP1BP68106 108 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 AP1B1Q10567 949 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 LRRC74BQ6ZQY2 392 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 NLRP9Q7RTR0 991 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 B4GALNT2Q8NHY0 566 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 PTPRN2Q92932 1015 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 SMC6Q96SB8 1091 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 PIDD1Q9HB75 910 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 STX18Q9P2W9 335 aaKnown RBP20.11■□□□□ 0.81
CMTM3-201ENST00000361909 TBK1Q9UHD2 729 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 A0A0G2JMZ2 1700 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 EIF4E1BA6NMX2 242 aaKnown RBP20.11■□□□□ 0.81
CMTM3-201ENST00000361909 A8MXQ7 604 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 PSMD10O75832 226 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 PPP2R5CQ13362 524 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 TAF1BQ53T94 588 aaPredicted RBP20.11■□□□□ 0.81
CMTM3-201ENST00000361909 RNF220Q5VTB9 566 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 GADL1Q6ZQY3 521 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 CLNKQ7Z7G1 428 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 CHST13Q8NET6 341 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 LMO3Q8TAP4 145 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 GATA6Q92908 595 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 OPTNQ96CV9 577 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 GBP5Q96PP8 586 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 BTBD10Q9BSF8 475 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 NUP85Q9BW27 656 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 SYNCQ9H7C4 482 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 ACAD9Q9H845 621 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 AGTPBP1Q9UPW5 1226 aa20.11■□□□□ 0.81
CMTM3-201ENST00000361909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.11■□□□□ 0.81
CMTM3-201ENST00000361909 RSPH10B2B2RC85 870 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 NDC80O14777 642 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 CLDN3O15551 220 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 ATP9AO75110 1047 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 LRRN2O75325 713 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 RSPH10BP0C881 870 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 UBXN2AP68543 259 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 RCN1Q15293 331 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 DAB2IPQ5VWQ8 1189 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.1■□□□□ 0.81
CMTM3-201ENST00000361909 OTOP1Q7RTM1 612 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 ARHGAP24Q8N264 748 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 SCG3Q8WXD2 468 aaKnown RBP20.1■□□□□ 0.81
CMTM3-201ENST00000361909 TAAR1Q96RJ0 339 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 PAIP2Q9BPZ3 127 aaKnown RBP20.1■□□□□ 0.81
CMTM3-201ENST00000361909 TRABDQ9H4I3 376 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 UBIAD1Q9Y5Z9 338 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 LOXHD1Q8IVV2 1947 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 EXOC1LA0A1B0GW35 172 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 MAP3K13O43283 966 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 CBX6O95503 412 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 ADCY8P40145 1251 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 CACNA2D1P54289 1103 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 MAP1SQ66K74 1059 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-201ENST00000361909 NSMFQ6X4W1 530 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 SLC30A10Q6XR72 485 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 FAM81AQ8TBF8 368 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 STMN2Q93045 179 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 AZIN2Q96A70 460 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 RMDN3Q96TC7 470 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 RIT2Q99578 217 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 EPAS1Q99814 870 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 WDR11Q9BZH6 1224 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 DCLK3Q9C098 648 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 BHMT2Q9H2M3 363 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 PARVGQ9HBI0 331 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 PXMP2Q9NR77 195 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 AGPAT3Q9NRZ7 376 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 IL1RAPL1Q9NZN1 696 aa20.1■□□□□ 0.81
CMTM3-201ENST00000361909 MAP3K7O43318 606 aa20.09■□□□□ 0.81
CMTM3-201ENST00000361909 BAATQ14032 418 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-201ENST00000361909 PGM5Q15124 567 aa20.09■□□□□ 0.81
CMTM3-201ENST00000361909 CTC1Q2NKJ3 1217 aa20.09■□□□□ 0.81
CMTM3-201ENST00000361909 KHDC1Q4VXA5 237 aaKnown RBP20.09■□□□□ 0.81
CMTM3-201ENST00000361909 LRRC23Q53EV4 343 aaPredicted RBP20.09■□□□□ 0.81
CMTM3-201ENST00000361909 ZCCHC9Q8N567 271 aaKnown RBP20.09■□□□□ 0.81
CMTM3-201ENST00000361909 TMEM174Q8WUU8 243 aa20.09■□□□□ 0.81
CMTM3-201ENST00000361909 C1orf54Q8WWF1 131 aa20.09■□□□□ 0.81
CMTM3-201ENST00000361909 NCSTNQ92542 709 aa20.09■□□□□ 0.81
CMTM3-201ENST00000361909 RBM41Q96IZ5 413 aaKnown RBP20.09■□□□□ 0.81
CMTM3-201ENST00000361909 POP1Q99575 1024 aaKnown RBP20.09■□□□□ 0.81
CMTM3-201ENST00000361909 ZNF577Q9BSK1 485 aa20.09■□□□□ 0.81
CMTM3-201ENST00000361909 DDX43Q9NXZ2 648 aaKnown RBP20.09■□□□□ 0.81
CMTM3-201ENST00000361909 PSMG1O95456 288 aa20.08■□□□□ 0.81
CMTM3-201ENST00000361909 CHRNB2P17787 502 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms