RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 DNAJC17Q9NVM6 304 aaKnown RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 AMACRQ9UHK6 382 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 MAFBQ9Y5Q3 323 aaPredicted RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 LRRC37AA6NMS7 1700 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 NRXN2Q9P2S2 1712 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 SUPT3HO75486 399 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 GJB6O95452 261 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 STAG3L1P0CL83 205 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 ATP2A2P16615 1042 aaKnown RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 CDK17Q00537 523 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 SEPT7Q16181 437 aaKnown RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 CCDC80Q76M96 950 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 TLK2Q86UE8 772 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 RPS6KC1Q96S38 1066 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 NAP1L3Q99457 506 aaPredicted RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 GALNT8Q9NY28 637 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 RASAL2Q9UJF2 1139 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 FANCGO15287 622 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 MAFO75444 373 aaPredicted RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 FAM107AO95990 144 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 AKAP5P24588 427 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 EPHB4P54760 987 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 INHBEP58166 350 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 CCL14Q16627 93 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 PTGISQ16647 500 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 ALS2CLQ60I27 953 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 OR6B2Q6IFH4 312 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 LLGL2Q6P1M3 1020 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 NOP9Q86U38 636 aaKnown RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 RHOT2Q8IXI1 618 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 KIAA0319LQ8IZA0 1049 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 PPFIBP2Q8ND30 876 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 FAM149B1Q96BN6 582 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 ZWILCHQ9H900 591 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 DNAAF2Q9NVR5 837 aaKnown RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 PCSK1NQ9UHG2 260 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 ALG6Q9Y672 507 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 MYH10P35580 1976 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 GTPBP10A4D1E9 387 aaKnown RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 GRID2IPA4D2P6 1211 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 PI4K2BG5E9Z4 385 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 PDE2AO00408 941 aaPredicted RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 GRAP2O75791 330 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 ALDH3A1P30838 453 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 RGS7P49802 495 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 MARSP56192 900 aaKnown RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 TMEM110Q86TL2 294 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 TPCN2Q8NHX9 752 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 LNX1Q8TBB1 728 aaPredicted RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 PLEKHO2Q8TD55 490 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 GTF3C2Q8WUA4 911 aaPredicted RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 FIZ1Q96SL8 496 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 MED10Q9BTT4 135 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 DHX33Q9H6R0 707 aaKnown RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 FAM49BQ9NUQ9 324 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 PRMT7Q9NVM4 692 aaPredicted RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 HESX1Q9UBX0 185 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 KCNH4Q9UQ05 1017 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 TTLL13PA6NNM8 815 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 FNTAP49354 379 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 AARSP49588 968 aaKnown RBP eCLIP9.69□□□□□ -0.86
CALD1-202ENST00000361901 YWHAEP62258 255 aaKnown RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 CALCOCO2Q13137 446 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 CUL2Q13617 745 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 CYP4A22Q5TCH4 519 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 MPZL3Q6UWV2 235 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 CXCL17Q6UXB2 119 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 CAPN12Q6ZSI9 719 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 MAB21L3Q8N8X9 362 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 ATL2Q8NHH9 583 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 ACSF2Q96CM8 615 aaPredicted RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 TLR10Q9BXR5 811 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 VTA1Q9NP79 307 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 INTUQ9ULD6 942 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 ADAMTS5Q9UNA0 930 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 NOC2LQ9Y3T9 749 aaKnown RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 H0Y3Z8 333 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 TRPA1O75762 1119 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 CSPG5O95196 566 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 FAM200BP0CF97 657 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 COMTP21964 271 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 MDH1P40925 334 aaKnown RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 PLTPP55058 493 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 MRPS35P82673 323 aaKnown RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 KLC1Q07866 573 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 SURF1Q15526 300 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 DAB2IPQ5VWQ8 1189 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 TDRD10Q5VZ19 366 aaKnown RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 MFSD14CQ5VZR4 134 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 CYP4F22Q6NT55 531 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 CHADLQ6NUI6 762 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 RGMBQ6NW40 437 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 ILDR2Q71H61 639 aa9.69□□□□□ -0.86
CALD1-202ENST00000361901 DDX42Q86XP3 938 aaKnown RBP eCLIP9.69□□□□□ -0.86
CALD1-202ENST00000361901 MSL3Q8N5Y2 521 aaKnown RBP9.69□□□□□ -0.86
CALD1-202ENST00000361901 UBA3Q8TBC4 463 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms