RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 USP42Q9H9J4 1324 aaKnown RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 ICAM1P05362 532 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 OXCT1P55809 520 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 GFPT1Q06210 699 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CENPPQ6IPU0 288 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 MMGT1Q8N4V1 131 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 ARHGEF26Q96DR7 871 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 XPO6Q96QU8 1125 aaKnown RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CCDC90BQ9GZT6 254 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 RNF208Q9H0X6 261 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 RIC8BQ9NVN3 520 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 APEX2Q9UBZ4 518 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 FBXL5Q9UKA1 691 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 SUPT3HB4E1H0 165 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 SMAPO00193 183 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 HAUS5O94927 633 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 KITP10721 976 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 GPD1P21695 349 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 KRT20P35900 424 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 HIRAP54198 1017 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 PMS2P54278 862 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 PLCL1Q15111 1095 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 ANKRD7Q92527 254 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CLMNQ96JQ2 1002 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 TRIM4Q9C037 500 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CIPCQ9C0C6 399 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 RSAD1Q9HA92 442 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CCDC195A0A1B0GUA6 201 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 PQBP1O60828 265 aaKnown RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 MYL4P12829 197 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CAP2P40123 477 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 ARFIP2P53365 341 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 BACE1P56817 501 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 SKOR1P84550 965 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 FOXO4P98177 505 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 DHX34Q14147 1143 aaKnown RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 SLC45A4Q5BKX6 768 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CCDC137Q6PK04 289 aaKnown RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 DSG4Q86SJ6 1040 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 SLC25A41Q8N5S1 370 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CCDC3Q9BQI4 270 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 STK33Q9BYT3 514 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 ABHD10Q9NUJ1 306 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 DPP3Q9NY33 737 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 SPASTQ9UBP0 616 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 KIAA1257Q9ULG3 409 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 NDUFB5O43674 189 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 STRNO43815 780 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CENPAP49450 140 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 INHBEP58166 350 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 RPS6P62753 249 aaKnown RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 SLC7A5Q01650 507 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 SGCGQ13326 291 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 ZKSCAN4Q969J2 545 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-203ENST00000361654 APOL5Q9BWW9 433 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CCSER1Q9C0I3 900 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 ZFP69BQ9UJL9 534 aa11.45□□□□□ -0.58
CLIP1-203ENST00000361654 CXCL11O14625 94 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 CAPN15O75808 1086 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 HLA-DRAP01903 254 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 YY1P25490 414 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 ZNF211Q13398 564 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-203ENST00000361654 ARID5BQ14865 1188 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 ZNF513Q8N8E2 541 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-203ENST00000361654 TPX2Q9ULW0 747 aaKnown RBP11.44□□□□□ -0.58
CLIP1-203ENST00000361654 PLAAQ9Y263 795 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 PCDHB2Q9Y5E7 798 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 ADGBQ8N7X0 1667 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 CCDC78A2IDD5 438 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 MSCO60682 206 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 AP1G2O75843 785 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 THP07101 528 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 HPGDP15428 266 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 SPRP35270 261 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-203ENST00000361654 E2F4Q16254 413 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 ZNF677Q86XU0 584 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 IPMKQ8NFU5 416 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 SLC20A1Q8WUM9 679 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 AGBL1Q96MI9 1066 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 PAK5Q9P286 719 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 ITIH6Q6UXX5 1313 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 RHOBTB1O94844 696 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 APRTP07741 180 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 MLNP12872 115 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 SERPINB4P48594 390 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 HDAC4P56524 1084 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 CNTN1Q12860 1018 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 INPP5AQ14642 412 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 C11orf96Q7Z7L8 435 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 ST13P4Q8IZP2 240 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-203ENST00000361654 ATXN7L3BQ96GX2 97 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 SENP2Q9HC62 589 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 TMEM8AQ9HCN3 771 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 KCNH7Q9NS40 1196 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 P4HA2O15460 535 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 MMEP08473 750 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 AKR1A1P14550 325 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 SSTR3P32745 418 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-203ENST00000361654 SOAT1P35610 550 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms