RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ITGA11Q9UKX5 1188 aa14.58□□□□□ -0.08
CTR9-201ENST00000361367 TRPV2Q9Y5S1 764 aa14.58□□□□□ -0.08
CTR9-201ENST00000361367 AFDNP55196 1824 aaKnown RBP14.58□□□□□ -0.08
CTR9-201ENST00000361367 WDR91A4D1P6 747 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 HMGB1P1B2RPK0 211 aaPredicted RBP14.57□□□□□ -0.08
CTR9-201ENST00000361367 ZNF189O75820 626 aaPredicted RBP14.57□□□□□ -0.08
CTR9-201ENST00000361367 RAP1GAPP47736 663 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 PTPN11Q06124 597 aaPredicted RBP14.57□□□□□ -0.08
CTR9-201ENST00000361367 PSMD6Q15008 389 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 KLHL38Q2WGJ6 581 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 OR6P1Q8NGX9 317 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.57□□□□□ -0.08
CTR9-201ENST00000361367 LRRC1Q9BTT6 524 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 PRAMEP78395 509 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 NAA30Q147X3 362 aaPredicted RBP14.57□□□□□ -0.08
CTR9-201ENST00000361367 CTXN3Q4LDR2 81 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 TATDN2Q93075 761 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 RMDN1Q96DB5 314 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 LRRC37A3O60309 1634 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 H7C4K7 107 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 CST8O60676 142 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 CABYRO75952 493 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 GZMAP12544 262 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 BOLA3Q53S33 107 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 ANKRD23Q86SG2 305 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 ATP11CQ8NB49 1132 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 ASAP3Q8TDY4 903 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 PABPC5Q96DU9 382 aaKnown RBP14.57□□□□□ -0.08
CTR9-201ENST00000361367 DDIT4Q9NX09 232 aa14.57□□□□□ -0.08
CTR9-201ENST00000361367 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.57□□□□□ -0.08
CTR9-201ENST00000361367 GLRA2P23416 452 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 CCT5P48643 541 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 BCAT1P54687 386 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 IL17AQ16552 155 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 TDRD10Q5VZ19 366 aaKnown RBP14.56□□□□□ -0.08
CTR9-201ENST00000361367 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.56□□□□□ -0.08
CTR9-201ENST00000361367 TTC30AQ86WT1 665 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 TMEM176AQ96HP8 235 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.56□□□□□ -0.08
CTR9-201ENST00000361367 DSEQ9UL01 958 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 RASA4BC9J798 803 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 RASA4O43374 803 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 ALDH2P05091 517 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 LHX1P48742 406 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 ITGB3BPQ13352 177 aaPredicted RBP14.56□□□□□ -0.08
CTR9-201ENST00000361367 CHSY1Q86X52 802 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 ATPAF2Q8N5M1 289 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 PPP1R13LQ8WUF5 828 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 AGAP3Q96P47 875 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 TMEM39AQ9NV64 488 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 KANSL3Q9P2N6 904 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 TISP43B9A030 160 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 ANKRD63C9JTQ0 380 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 PHF2O75151 1096 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 APRTP07741 180 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 ZBTB48P10074 688 aaPredicted RBP14.56□□□□□ -0.08
CTR9-201ENST00000361367 FLT3LGP49771 235 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 SPRYD7Q5W111 196 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 NUDT18Q6ZVK8 323 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 PLPPR4Q7Z2D5 763 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 SPATA18Q8TC71 538 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 ZNF518BQ9C0D4 1074 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 SH3BP1Q9Y3L3 701 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 WNT7AO00755 349 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 COPEO14579 308 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 TTI1O43156 1089 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 RBP3P10745 1247 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 IRF1P10914 325 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 EIF4BP23588 611 aaKnown RBP14.56□□□□□ -0.08
CTR9-201ENST00000361367 CASP5P51878 434 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 HIF1AQ16665 826 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 SLC47A2Q86VL8 602 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 GLIS3Q8NEA6 775 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 TPCN2Q8NHX9 752 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 RAB6BQ9NRW1 208 aa14.56□□□□□ -0.08
CTR9-201ENST00000361367 M0QYT0 321 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 CLGNO14967 610 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 ATP9BO43861 1147 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 LRG1P02750 347 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 URODP06132 367 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 PRKAR2AP13861 404 aaKnown RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 MDM2Q00987 491 aaPredicted RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 ELAVL2Q12926 359 aaKnown RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 ARHGAP18Q8N392 663 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 TNFRSF25Q93038 417 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 DNAJC19Q96DA6 116 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 NMRK2Q9NPI5 230 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 ARHGAP42A6NI28 874 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 TADA3O75528 432 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 HARS2P49590 506 aaKnown RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 SESN2P58004 480 aaPredicted RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 BYSLQ13895 437 aaKnown RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 NFE2Q16621 373 aaPredicted RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 SRRM1Q8IYB3 904 aaKnown RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 SCG3Q8WXD2 468 aaKnown RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 TMEM134Q9H6X4 195 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 AHDC1Q5TGY3 1603 aaPredicted RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 A0A087WUV0 522 aaPredicted RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 IGKV6D-41A0A0C4DH26 115 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 CFAP69A5D8W1 941 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms