RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 SEPT3Q9UH03 358 aa12.77□□□□□ -0.37
CCDC144A-204ENST00000360524 CNTNAP4Q9C0A0 1308 aa12.77□□□□□ -0.37
CCDC144A-204ENST00000360524 MYMKA6NI61 221 aa12.77□□□□□ -0.37
CCDC144A-204ENST00000360524 CYBBP04839 570 aa12.77□□□□□ -0.37
CCDC144A-204ENST00000360524 ATP6V1E1P36543 226 aa12.77□□□□□ -0.37
CCDC144A-204ENST00000360524 SIKE1Q9BRV8 207 aa12.77□□□□□ -0.37
CCDC144A-204ENST00000360524 E9PCH4 1651 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 FAM95CA0A1B0GW59 222 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 UCHL3P15374 230 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 S100A5P33763 92 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 CPA2P48052 419 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 NLRP11P59045 1033 aaKnown RBP12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 STX3Q13277 289 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 PTK7Q13308 1070 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 MAPRE2Q15555 327 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 TASP1Q9H6P5 420 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 UVRAGQ9P2Y5 699 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 IL18RAPO95256 599 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 RARBP10826 455 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 GMPSP49915 693 aaPredicted RBP12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 ACTR2P61160 394 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 PDAP1Q13442 181 aaKnown RBP12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 TC2NQ8N9U0 490 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 MDM1Q8TC05 714 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 MED15Q96RN5 788 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 C20orf96Q9NUD7 363 aaPredicted RBP12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 SLC9A1P19634 815 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 PAX7P23759 505 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 EPC2Q52LR7 807 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 AGBL2Q5U5Z8 902 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 ZNF467Q7Z7K2 595 aaPredicted RBP12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 SLC25A41Q8N5S1 370 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 CHST13Q8NET6 341 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 EME1Q96AY2 570 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 JMJD4Q9H9V9 463 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 TRPC7Q9HCX4 862 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 PSMC3IPQ9P2W1 217 aaPredicted RBP12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 CD4P01730 458 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 SERPIND1P05546 499 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 ATP6V1B1P15313 513 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 ITPK1Q13572 414 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 KRT72Q14CN4 511 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 LRRC8BQ6P9F7 803 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 ZNF555Q8NEP9 628 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 MAP3K14Q99558 947 aa12.76□□□□□ -0.37
CCDC144A-204ENST00000360524 GRIN3BO60391 1043 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 RPS12P25398 132 aaKnown RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 RPS6P62753 249 aaKnown RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 STK4Q13043 487 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 ZCWPW2Q504Y3 356 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 PLA2G4FQ68DD2 849 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 LVRNQ6Q4G3 990 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 EFHBQ8N7U6 833 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 RBBP8NLQ8NC74 664 aaPredicted RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 ITGA8P53708 1063 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 ANTXR2P58335 489 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 ZNF200P98182 395 aaPredicted RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 TMEM62Q0P6H9 643 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 INPP5AQ14642 412 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 USP10Q14694 798 aaKnown RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 NUDT18Q6ZVK8 323 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 PI4K2AQ9BTU6 479 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 AP3B1O00203 1094 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 DEFA1P59665 94 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 DEFA3P59666 94 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 IFNEQ86WN2 208 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 RIT2Q99578 217 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 PRDM4Q9UKN5 801 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 ITIH6Q6UXX5 1313 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 CNTNAP5Q8WYK1 1306 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 TMEM120BA0PK00 339 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 EIF3DO15371 548 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 MAFGO15525 162 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 ITGA4P13612 1032 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 CYP2B6P20813 491 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 COMTP21964 271 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 HMOX2P30519 316 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 KPNB1Q14974 876 aaKnown RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 CYP4A22Q5TCH4 519 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 USP49Q70CQ1 688 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 PRPF39Q86UA1 669 aaKnown RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 JAMLQ86YT9 394 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 ZNF513Q8N8E2 541 aaPredicted RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 TMEM106CQ9BVX2 250 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 TMEM39BQ9GZU3 492 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 TRIM45Q9H8W5 580 aaPredicted RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 LSM7Q9UK45 103 aaKnown RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 COPG1Q9Y678 874 aaKnown RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 PSMD3O43242 534 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 RPS6KA5O75582 802 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 OCM2P0CE71 109 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 OCMP0CE72 109 aaPredicted RBP12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 CETPP11597 493 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 PDGFRAP16234 1089 aa12.75□□□□□ -0.37
CCDC144A-204ENST00000360524 SNX17Q15036 470 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms