RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 C18orf25Q96B23 403 aaPredicted RBP14.78□□□□□ -0.04
PDLIM5-203ENST00000359265 TRIM43Q96BQ3 446 aaPredicted RBP14.78□□□□□ -0.04
PDLIM5-203ENST00000359265 PPP1R12CQ9BZL4 782 aa14.78□□□□□ -0.04
PDLIM5-203ENST00000359265 UBN1Q9NPG3 1134 aa14.78□□□□□ -0.04
PDLIM5-203ENST00000359265 TFR2Q9UP52 801 aa14.78□□□□□ -0.04
PDLIM5-203ENST00000359265 PAXBP1Q9Y5B6 917 aa14.78□□□□□ -0.04
PDLIM5-203ENST00000359265 ANO9A1A5B4 782 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 MACROD2A1Z1Q3 448 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 BTNL10A8MVZ5 291 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 PTGESO14684 152 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 MMEP08473 750 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 GZMAP12544 262 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 CD58P19256 250 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 CASQ1P31415 396 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 MLH1P40692 756 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 SV2CQ496J9 727 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 PLEKHG4Q58EX7 1191 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 TMEM31Q5JXX7 168 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 TRIM72Q6ZMU5 477 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 TMEM130Q8N3G9 435 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 DDX1Q92499 740 aaKnown RBP14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 KHSRPQ92945 711 aaKnown RBP eCLIP14.77□□□□□ -0.052e-7■■□□□ 13
PDLIM5-203ENST00000359265 PPP1R10Q96QC0 940 aaKnown RBP14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 GAD1Q99259 594 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 PDCL3Q9H2J4 239 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 SMYD3Q9H7B4 428 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 RSAD1Q9HA92 442 aa14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 PRDM5Q9NQX1 630 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-203ENST00000359265 TSC2P49815 1807 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 REV3LO60673 3130 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 FAM86C2PA6NEL3 165 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 TMCO5BA8MYB1 307 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 PIRO00625 290 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 KIAA0355O15063 1070 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 THAP12O43422 761 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 NBNO60934 754 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 RTN2O75298 545 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 TACC1O75410 805 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 ABL1P00519 1130 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 CXCL10P02778 98 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 THP07101 528 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 PAEPP09466 180 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 WEE2P0C1S8 567 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 TMEM253P0C7T8 217 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 RAG1P15918 1043 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 LRPAP1P30533 357 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 CYP2C18P33260 490 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 RAP1GAPP47736 663 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 TAF6P49848 677 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 TFF2Q03403 129 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 IFI16Q16666 785 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 PPP1R2P3Q6NXS1 205 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 AGMOQ6ZNB7 445 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 ECHDC2Q86YB7 292 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 SLC35F6Q8N357 371 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 RNF10Q8N5U6 811 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 RNF169Q8NCN4 708 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 CTNNBL1Q8WYA6 563 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 LPPQ93052 612 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 RNPC3Q96LT9 517 aaKnown RBP14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 ZFP42Q96MM3 310 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 NOX5Q96PH1 765 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 ALS2CR12Q96Q35 445 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 WDR24Q96S15 920 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 PACSIN1Q9BY11 444 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 IRX2Q9BZI1 471 aaPredicted RBP14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 WNT8AQ9H1J5 351 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 PRDM12Q9H4Q4 367 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 ACP6Q9NPH0 428 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 RGS18Q9NS28 235 aa14.76□□□□□ -0.05
PDLIM5-203ENST00000359265 NCANO14594 1321 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 A0A0A6YYK5 440 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 ANKRD62A6NC57 917 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 ARL5CA6NH57 179 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 MEIS3P2A8K0S8 358 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 C9IYK1 514 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 PPEF2O14830 753 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 TIMP1P01033 207 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 GALCP54803 685 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 CCL23P55773 120 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 SOX4Q06945 474 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 INCA1Q0VD86 236 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 GRIK3Q13003 919 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 SLC24A5Q71RS6 500 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 PALB2Q86YC2 1186 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 TRIM58Q8NG06 486 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 SCLYQ96I15 445 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 MMS19Q96T76 1030 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 PCDHB18PQ96TA0 734 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 SDCBP2Q9H190 292 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 ISCUQ9H1K1 167 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 TSPYL2Q9H2G4 693 aaPredicted RBP14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 RNF19AQ9NV58 838 aa14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 PUF60Q9UHX1 559 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-203ENST00000359265 XIRP2A4UGR9 3374 aa14.74□□□□□ -0.05
PDLIM5-203ENST00000359265 MED7O43513 233 aa14.74□□□□□ -0.05
PDLIM5-203ENST00000359265 CILPO75339 1184 aa14.74□□□□□ -0.05
PDLIM5-203ENST00000359265 MOCS3O95396 460 aa14.74□□□□□ -0.05
PDLIM5-203ENST00000359265 EOMESO95936 686 aa14.74□□□□□ -0.05
PDLIM5-203ENST00000359265 IBSPP21815 317 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms