RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 KCNK18Q7Z418 384 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 SLC47A2Q86VL8 602 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 C3orf20Q8ND61 904 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 OLFM3Q96PB7 478 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 FAM129AQ9BZQ8 928 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 DIP2BQ9P265 1576 aa14.37□□□□□ -0.11
VCP-201ENST00000358901 A0A0A6YYK5 440 aaPredicted RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 MAP2K7O14733 419 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 NPTX2P47972 431 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 PTENP60484 403 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 STILQ15468 1287 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 ATF7IP2Q5U623 682 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 BTNL9Q6UXG8 535 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 ANGPTL8Q6UXH0 198 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 DDIASQ8IXT1 998 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 MICALL2Q8IY33 904 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 PRMT6Q96LA8 375 aaPredicted RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 METTL5Q9NRN9 209 aaKnown RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.36□□□□□ -0.11
VCP-201ENST00000358901 ARHGAP10A1A4S6 786 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 AIM2O14862 343 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 DNAJC6O75061 913 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 KCNA3P22001 575 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 COBLL1Q53SF7 1204 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 SLC35C1Q96A29 364 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 HAO1Q9UJM8 370 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 PIN4Q9Y237 131 aaKnown RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 GTPBP10A4D1E9 387 aaKnown RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 C3orf70A6NLC5 250 aaPredicted RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 PPARGP37231 505 aaPredicted RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 SULT1E1P49888 294 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 USP10Q14694 798 aaKnown RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 TMEM154Q6P9G4 183 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 SV2AQ7L0J3 742 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 TSEN2Q8NCE0 465 aaKnown RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 USP33Q8TEY7 942 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 ULK4Q96C45 1275 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 NSL1Q96IY1 281 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 SHCBP1LQ9BZQ2 653 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 CCDC90BQ9GZT6 254 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 C17orf75Q9HAS0 396 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 OLFML3Q9NRN5 406 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 KCND1Q9NSA2 647 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 CNOT7Q9UIV1 285 aaKnown RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 UBOX5O94941 541 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 CACNB2Q08289 660 aaPredicted RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 NLRP9Q7RTR0 991 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 ARHGAP18Q8N392 663 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 TMA16Q96EY4 203 aaKnown RBP14.36□□□□□ -0.11
VCP-201ENST00000358901 SMARCAD1Q9H4L7 1026 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 HEY2Q9UBP5 337 aa14.36□□□□□ -0.11
VCP-201ENST00000358901 DDTLA6NHG4 134 aaPredicted RBP14.35□□□□□ -0.11
VCP-201ENST00000358901 NQO1P15559 274 aaKnown RBP14.35□□□□□ -0.11
VCP-201ENST00000358901 TAL1P17542 331 aaPredicted RBP14.35□□□□□ -0.11
VCP-201ENST00000358901 CHI3L2Q15782 390 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 VPS72Q15906 364 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 KCNV1Q6PIU1 500 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 AENQ8WTP8 325 aaKnown RBP14.35□□□□□ -0.11
VCP-201ENST00000358901 AURKCQ9UQB9 309 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 hCG_2014768A0A024R1R8 64 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 WTIPA6NIX2 430 aaPredicted RBP14.35□□□□□ -0.11
VCP-201ENST00000358901 SMAPO00193 183 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 DDX3XO00571 662 aaKnown RBP eCLIP14.35□□□□□ -0.112e-14■■■□□ 17.9
VCP-201ENST00000358901 KIF1CO43896 1103 aaKnown RBP14.35□□□□□ -0.11
VCP-201ENST00000358901 ADCY3O60266 1144 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 GPD1P21695 349 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 RFC5P40937 340 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 BTBD8Q5XKL5 378 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 PRPF31Q8WWY3 499 aaKnown RBP14.35□□□□□ -0.11
VCP-201ENST00000358901 KCNK16Q96T55 309 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 PLEKHA5Q9HAU0 1116 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 SP110Q9HB58 689 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 WDR70Q9NW82 654 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 DLGAP2Q9P1A6 1054 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 TSR3Q9UJK0 312 aaKnown RBP14.35□□□□□ -0.11
VCP-201ENST00000358901 GRID1Q9ULK0 1009 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 GLIS3Q8NEA6 775 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 SLC5A5Q92911 643 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 TASP1Q9H6P5 420 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 WHRNQ9P202 907 aa14.35□□□□□ -0.11
VCP-201ENST00000358901 ASB14A6NK59 587 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 PRPF39Q86UA1 669 aaKnown RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 PSTPIP1O43586 416 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 ICAM1P05362 532 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 GFAPP14136 432 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 STIP1P31948 543 aaKnown RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 INPP1P49441 399 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 AARSP49588 968 aaKnown RBP eCLIP14.34□□□□□ -0.11
VCP-201ENST00000358901 ZNF844Q08AG5 666 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 TMEM62Q0P6H9 643 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 DYNC1I2Q13409 638 aaKnown RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 ORC1Q13415 861 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 KYAT1Q16773 422 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 VGLL2Q8N8G2 317 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 SPDYE1Q8NFV5 336 aaPredicted RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 AFG1LQ8WV93 481 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 DDX20Q9UHI6 824 aaKnown RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 SUFUQ9UMX1 484 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 SYCE1LA8MT33 242 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 C19orf81C9J6K1 198 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms