RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 PIF1Q9H611 641 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 EMILIN3Q9NT22 766 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 CNOT8Q9UFF9 292 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 GRAP2O75791 330 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 CLK1P49759 484 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 PDIA2Q13087 525 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 AMHR2Q16671 573 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 TYW3Q6IPR3 259 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 TRIM65Q6PJ69 517 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 CDR2LQ86X02 465 aaPredicted RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 SLC35F6Q8N357 371 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 SLC7A14Q8TBB6 771 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 UCMAQ8WVF2 138 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 PTPRN2Q92932 1015 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 BHLHE41Q9C0J9 482 aaPredicted RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 MRPL40Q9NQ50 206 aaKnown RBP10.19□□□□□ -0.78
CHD3-202ENST00000358181 POLE3Q9NRF9 147 aa10.19□□□□□ -0.78
CHD3-202ENST00000358181 KIF1BO60333 1816 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 MSH4O15457 936 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 KRT6AP02538 564 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 KRT6BP04259 564 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 KRT6CP48668 564 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 FNTAP49354 379 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 RWDD2BP57060 319 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 RHAGQ02094 409 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 INPP5AQ14642 412 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 SKA1Q96BD8 255 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 CLCC1Q96S66 551 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 SIKE1Q9BRV8 207 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 TBCDQ9BTW9 1192 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 YIPF3Q9GZM5 350 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 PYCARDQ9ULZ3 195 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 KIF1CO43896 1103 aaKnown RBP10.18□□□□□ -0.78
CHD3-202ENST00000358181 ECE2O60344 883 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 CYP24A1Q07973 514 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 SPARCL1Q14515 664 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 ACAP2Q15057 778 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 TBC1D25Q3MII6 688 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 DPCR1Q3MIW9 517 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 EPHA10Q5JZY3 1008 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 ZNF618Q5T7W0 954 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 TDRD10Q5VZ19 366 aaKnown RBP10.18□□□□□ -0.78
CHD3-202ENST00000358181 SYTL5Q8TDW5 730 aaPredicted RBP10.18□□□□□ -0.78
CHD3-202ENST00000358181 FAM81BQ96LP2 452 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 SH3GL1Q99961 368 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 KANSL2Q9H9L4 492 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 AVENQ9NQS1 362 aaPredicted RBP10.18□□□□□ -0.78
CHD3-202ENST00000358181 KRT38O76015 456 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 IFNA16P05015 189 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 POTEIP0CG38 1075 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 HSMCR30P0CW71 290 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 NCAM1P13591 858 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 TCP1P17987 556 aaKnown RBP10.18□□□□□ -0.78
CHD3-202ENST00000358181 ABCD1P33897 745 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 GGCXP38435 758 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 RGS2P41220 211 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 CRKP46108 304 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 PDIA6Q15084 440 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 SARM1Q6SZW1 724 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 MPP6Q9NZW5 540 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 CLASP2O75122 1294 aaKnown RBP10.18□□□□□ -0.78
CHD3-202ENST00000358181 THPOP40225 353 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 CDH6P55285 790 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 C21orf59P57076 290 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 KRT31Q15323 416 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 ZNF746Q6NUN9 644 aaPredicted RBP10.18□□□□□ -0.78
CHD3-202ENST00000358181 KLHL3Q9UH77 587 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 LBPP18428 481 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 PTPN7P35236 360 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 METTL21CQ5VZV1 264 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 PROSER1Q86XN7 944 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 USP7Q93009 1102 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 EPN1Q9Y6I3 576 aaPredicted RBP10.18□□□□□ -0.78
CHD3-202ENST00000358181 A0A0G2JLW4 131 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 GUCY1B2O75343 617 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 CEBPGP53567 150 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 KRT74Q7RTS7 529 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 DHRS1Q96LJ7 313 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 JSRP1Q96MG2 331 aaPredicted RBP10.18□□□□□ -0.78
CHD3-202ENST00000358181 RNF14Q9UBS8 474 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 KLHL20Q9Y2M5 609 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 DYRK1BQ9Y463 629 aa10.18□□□□□ -0.78
CHD3-202ENST00000358181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHD3-202ENST00000358181 NLRP1Q9C000 1473 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 C16orf96A6NNT2 1141 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 TXNP10599 105 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 ITGB6P18564 788 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 JAK1P23458 1154 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 YY1P25490 414 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 ERMARDQ5T6L9 678 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 OR8H2Q8N162 312 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 MDM1Q8TC05 714 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 CEP95Q96GE4 821 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 SH2D3AQ9BRG2 576 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHD3-202ENST00000358181 MRPL4Q9BYD3 311 aaKnown RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 C20orf96Q9NUD7 363 aaPredicted RBP10.17□□□□□ -0.78
CHD3-202ENST00000358181 EVA1BQ9NVM1 165 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 NEDD4P46934 1319 aa10.17□□□□□ -0.78
CHD3-202ENST00000358181 MOXD2PA6NHM9 499 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms