RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 A0A087X0T9 212 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 FAM228BP0C875 321 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 VCPP55072 806 aaKnown RBP15.5■□□□□ 0.07
CHD4-201ENST00000357008 BTKQ06187 659 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 ATPAF2Q8N5M1 289 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 ZNF556Q9HAH1 456 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 SNX9Q9Y5X1 595 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 PLOD1Q02809 727 aaPredicted RBP15.5■□□□□ 0.07
CHD4-201ENST00000357008 PTPAQ15257 358 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 MFN1Q8IWA4 741 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 IL1RAPL1Q9NZN1 696 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 TJP2Q9UDY2 1190 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 MOSPD1Q9UJG1 213 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 SYNDIG1LA6NDD5 238 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 CRB1P82279 1406 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 ADRM1Q16186 407 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 SPDYAQ5MJ70 313 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 THEMIS2Q5TEJ8 643 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 SH3KBP1Q96B97 665 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 THAP2Q9H0W7 228 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 C10orf88Q9H8K7 445 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 NYAP2Q9P242 653 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 TRPC5OSA6NMA1 111 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 EEF2KO00418 725 aaKnown RBP15.5■□□□□ 0.07
CHD4-201ENST00000357008 HIST1H2AGP0C0S8 130 aaPredicted RBP15.5■□□□□ 0.07
CHD4-201ENST00000357008 HIST1H2ADP20671 130 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 SERPINB1P30740 379 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 CLK1P49759 484 aaKnown RBP15.5■□□□□ 0.07
CHD4-201ENST00000357008 SHCBP1Q8NEM2 672 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 EPS8L3Q8TE67 593 aaKnown RBP15.5■□□□□ 0.07
CHD4-201ENST00000357008 HIST1H2AHQ96KK5 128 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 HIST1H2AJQ99878 128 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 H2AFJQ9BTM1 129 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 CAAP1Q9H8G2 361 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 SENP2Q9HC62 589 aa15.5■□□□□ 0.07
CHD4-201ENST00000357008 EPB41L4AQ9HCS5 686 aaPredicted RBP15.5■□□□□ 0.07
CHD4-201ENST00000357008 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.5■□□□□ 0.07
CHD4-201ENST00000357008 ATP6V1B1P15313 513 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 STIP1P31948 543 aaKnown RBP15.49■□□□□ 0.07
CHD4-201ENST00000357008 STX5Q13190 355 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 MROH9Q5TGP6 573 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 TTC33Q6PID6 262 aaPredicted RBP15.49■□□□□ 0.07
CHD4-201ENST00000357008 EFL1Q7Z2Z2 1120 aaKnown RBP15.49■□□□□ 0.07
CHD4-201ENST00000357008 DCLRE1BQ9H816 532 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 TAF6LQ9Y6J9 622 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 FLT1P17948 1338 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 DCAF4L1Q3SXM0 396 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 DEPDC1Q5TB30 811 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 ACAD10Q6JQN1 1059 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 TMEM143Q96AN5 459 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 CNDP1Q96KN2 507 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 OLFML3Q9NRN5 406 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 HAO1Q9UJM8 370 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 NCOA3Q9Y6Q9 1424 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 FAM95CA0A1B0GW59 222 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 APOA4P06727 396 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 KCNK10P57789 538 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 MYO1GB0I1T2 1018 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 NDUFS3O75489 264 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 GPD1P21695 349 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 NPEPPSP55786 919 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 TMEM132DQ14C87 1099 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 APPL2Q8NEU8 664 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 ACTRT1Q8TDG2 376 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 FAM111AQ96PZ2 611 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 SH2D3AQ9BRG2 576 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 IL25Q9H293 177 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 CAPN6Q9Y6Q1 641 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 ABCC3O15438 1527 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 PSTPIP1O43586 416 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 DGKIO75912 1065 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 SLC44A4Q53GD3 710 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 FAM71DQ8N9W8 422 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 WHRNQ9P202 907 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 TSC22D4Q9Y3Q8 395 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 FARP1Q9Y4F1 1045 aaPredicted RBP15.49■□□□□ 0.07
CHD4-201ENST00000357008 KBTBD12Q3ZCT8 623 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 GPAT2Q6NUI2 795 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 FRMD8P1Q9BZ68 369 aaPredicted RBP15.49■□□□□ 0.07
CHD4-201ENST00000357008 TMEM161AQ9NX61 479 aa15.49■□□□□ 0.07
CHD4-201ENST00000357008 MTSS1O43312 755 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 KRT75O95678 551 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 NDUFB10O96000 172 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 ALBP02768 609 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 PDHBP11177 359 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 OVGP1Q12889 678 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 LRRC6Q86X45 466 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 FAM162AQ96A26 154 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 MMP19Q99542 508 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 RIT2Q99578 217 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 RIC8BQ9NVN3 520 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 RSPH10B2B2RC85 870 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 FKBP9O95302 570 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 RSPH10BP0C881 870 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 FKBP9P1Q75LS8 142 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 POLIQ9UNA4 740 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 AP4S1Q9Y587 144 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 PREX2Q70Z35 1606 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 CCDC78A2IDD5 438 aa15.48■□□□□ 0.07
CHD4-201ENST00000357008 C5orf58C9J3I9 102 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms