RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZNF280BQ86YH2 543 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 SLC4A11Q8NBS3 891 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 TFAP2BQ92481 460 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 ZNF592Q92610 1267 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 IRX2Q9BZI1 471 aaPredicted RBP19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 FAM124BQ9H5Z6 455 aaPredicted RBP19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 DNAI1Q9UI46 699 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 BARX2Q9UMQ3 279 aaPredicted RBP19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 GUCA1BQ9UMX6 200 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 DUSP10Q9Y6W6 482 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 FAM170AA1A519 330 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 DDHD2O94830 711 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 RAG1P15918 1043 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 NDST1P52848 882 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 DSC1Q08554 894 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 ZNF677Q86XU0 584 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 KBTBD7Q8WVZ9 684 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 CASD1Q96PB1 797 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 WDR24Q96S15 920 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 TBC1D13Q9NVG8 400 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 L1RE1Q9UN81 338 aa19.35■□□□□ 0.69
SMARCD3-202ENST00000356800 TMCO5BA8MYB1 307 aa19.34■□□□□ 0.69
SMARCD3-202ENST00000356800 THAP12O43422 761 aa19.34■□□□□ 0.69
SMARCD3-202ENST00000356800 BRD2P25440 801 aaKnown RBP19.34■□□□□ 0.69
SMARCD3-202ENST00000356800 SSTR3P32745 418 aaPredicted RBP19.34■□□□□ 0.69
SMARCD3-202ENST00000356800 IKBKEQ14164 716 aa19.34■□□□□ 0.69
SMARCD3-202ENST00000356800 MFSD5Q6N075 450 aa19.34■□□□□ 0.69
SMARCD3-202ENST00000356800 URGCPQ8TCY9 931 aa19.34■□□□□ 0.69
SMARCD3-202ENST00000356800 ZNF606Q8WXB4 792 aa19.34■□□□□ 0.69
SMARCD3-202ENST00000356800 TSC2P49815 1807 aa19.34■□□□□ 0.69
SMARCD3-202ENST00000356800 FANCGO15287 622 aa19.33■□□□□ 0.69
SMARCD3-202ENST00000356800 PAEPP09466 180 aa19.33■□□□□ 0.69
SMARCD3-202ENST00000356800 TTC39CQ8N584 583 aa19.33■□□□□ 0.69
SMARCD3-202ENST00000356800 DDX27Q96GQ7 796 aaKnown RBP19.33■□□□□ 0.69
SMARCD3-202ENST00000356800 TMEM176AQ96HP8 235 aa19.33■□□□□ 0.69
SMARCD3-202ENST00000356800 UROC1Q96N76 676 aa19.33■□□□□ 0.69
SMARCD3-202ENST00000356800 PUF60Q9UHX1 559 aaKnown RBP19.33■□□□□ 0.69
SMARCD3-202ENST00000356800 INTUQ9ULD6 942 aa19.33■□□□□ 0.69
SMARCD3-202ENST00000356800 LRFN2Q9ULH4 789 aa19.33■□□□□ 0.69
SMARCD3-202ENST00000356800 COL4A6Q14031 1691 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 MYH10P35580 1976 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 BTNL10A8MVZ5 291 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 F8W810 466 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 CYB561D2O14569 222 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 HCRTO43612 131 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 TACC1O75410 805 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 AARSP49588 968 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 GALCP54803 685 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 CLEC16AQ2KHT3 1053 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 NPAS4Q8IUM7 802 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 COLGALT2Q8IYK4 626 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 PDCL2Q8N4E4 241 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 TOP6BLQ8N6T0 577 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 APPL2Q8NEU8 664 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 SENP8Q96LD8 212 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 ISCUQ9H1K1 167 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 KANSL3Q9P2N6 904 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 SALL4Q9UJQ4 1053 aa19.33■□□□□ 0.68
SMARCD3-202ENST00000356800 PTPRSQ13332 1948 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 CYP1A1P04798 512 aaPredicted RBP19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 ITGB1P05556 798 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 H2AFZP0C0S5 128 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 GZMAP12544 262 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 UNGP13051 313 aaPredicted RBP19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 CASQ1P31415 396 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 PAN2Q504Q3 1202 aaKnown RBP19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 TIGD5Q53EQ6 642 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 ZNF569Q5MCW4 686 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 H2AFVQ71UI9 128 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 RNF10Q8N5U6 811 aaKnown RBP19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 SECISBP2LQ93073 1101 aaKnown RBP19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 NT5C1AQ9BXI3 368 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 DNAJB4Q9UDY4 337 aa19.32■□□□□ 0.68
SMARCD3-202ENST00000356800 HUS1O60921 280 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 RTN2O75298 545 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 B3GAT3O94766 335 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 FTLP02792 175 aaPredicted RBP19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 CD19P15391 556 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 WSCD1Q658N2 575 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 DPH6Q7L8W6 267 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 OSTM1Q86WC4 334 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 PASD1Q8IV76 773 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 ADGRF2Q8IZF7 708 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 ABI1Q8IZP0 508 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 TMEM199Q8N511 208 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 OR6B3Q8NGW1 331 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 CYFIP2Q96F07 1278 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 HCSTQ9UBK5 93 aa19.31■□□□□ 0.68
SMARCD3-202ENST00000356800 ABHD14A-ACY1A0A1B0GW23 586 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 I3L4J1 428 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 KIF4AO95239 1232 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 ACRP10323 421 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 WARSP23381 471 aaKnown RBP19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 LMO2P25791 158 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 RNASELQ05823 741 aaKnown RBP19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 DCLRE1AQ6PJP8 1040 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 UNC93AQ86WB7 457 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 HASPINQ8TF76 798 aa19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 HEXIM2Q96MH2 286 aaKnown RBP19.3■□□□□ 0.68
SMARCD3-202ENST00000356800 DPEP3Q9H4B8 488 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms