RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 LRRC53A6NM62 1247 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 SPATA31C2B4DYI2 1134 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 C9IYK1 514 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 ATP9AO75110 1047 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 TADA3O75528 432 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 AKAP3O75969 853 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 URI1O94763 535 aaPredicted RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 SERPING1P05155 500 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 SCP2P22307 547 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 NMT1P30419 496 aaKnown RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 HOXC13P31276 330 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 GBP2P32456 591 aaPredicted RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 ABCD1P33897 745 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 NCKAP1LP55160 1127 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 TUBB4BP68371 445 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 MRPS6P82932 125 aaKnown RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 GTF2BQ00403 316 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 SIM2Q14190 667 aaPredicted RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 SPA17Q15506 151 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 MLF2Q15773 248 aaPredicted RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 UGCGQ16739 394 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 ASTE1Q2TB18 679 aaPredicted RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 SLC44A4Q53GD3 710 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 HGSNATQ68CP4 663 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 TAF2Q6P1X5 1199 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 CACNA2D4Q7Z3S7 1137 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 FAM186BQ8IYM0 893 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 FAM160A2Q8N612 972 aaPredicted RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 GLG1Q92896 1179 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 SHDQ96IW2 340 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 ZFP91Q96JP5 570 aaPredicted RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 ACCSQ96QU6 501 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 NAPGQ99747 312 aaPredicted RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 SMOC1Q9H4F8 434 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 WDR6Q9NNW5 1121 aaKnown RBP8.87□□□□□ -0.99
CD44-205ENST00000352818 SPG21Q9NZD8 308 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 AIPL1Q9NZN9 384 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 LRFN2Q9ULH4 789 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 SAMM50Q9Y512 469 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 PCDHB7Q9Y5E2 793 aa8.87□□□□□ -0.99
CD44-205ENST00000352818 DOCK5Q9H7D0 1870 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 A0A0U1RQJ8 604 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.86□□□□□ -0.99
CD44-205ENST00000352818 K7ENM7 598 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 BACH1O14867 736 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 PJA2O43164 708 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 FOXD2O60548 495 aaPredicted RBP8.86□□□□□ -0.99
CD44-205ENST00000352818 STBD1O95210 358 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 PSAPP07602 524 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 LAMP2P13473 410 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 EIF4A3P38919 411 aaKnown RBP8.86□□□□□ -0.99
CD44-205ENST00000352818 MAGEA9P43362 315 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 RPS9P46781 194 aaKnown RBP8.86□□□□□ -0.99
CD44-205ENST00000352818 KIF11P52732 1056 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 FAM189BP81408 668 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 ENPEPQ07075 957 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 KCNA1Q09470 495 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 EXOC3L4Q17RC7 722 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 WHAMMP3Q1A5X7 153 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 ZNF569Q5MCW4 686 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 SFMBT2Q5VUG0 894 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 C15orf39Q6ZRI6 1047 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 RRAGAQ7L523 313 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 OTUD6AQ7L8S5 288 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 KIAA1328Q86T90 577 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 FMNL3Q8IVF7 1028 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 SLC35F6Q8N357 371 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 MNS1Q8NEH6 495 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 BCL7CQ8WUZ0 217 aaPredicted RBP8.86□□□□□ -0.99
CD44-205ENST00000352818 SPIRE2Q8WWL2 714 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 TSC1Q92574 1164 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 KIFAP3Q92845 792 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 FGF14Q92915 247 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 JAKMIP2Q96AA8 810 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 CCDC42Q96M95 316 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 CCDC43Q96MW1 224 aaKnown RBP8.86□□□□□ -0.99
CD44-205ENST00000352818 ZNF558Q96NG5 402 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 VN1R3Q9BXE9 311 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 JPH1Q9HDC5 661 aaPredicted RBP8.86□□□□□ -0.99
CD44-205ENST00000352818 PKD2L1Q9P0L9 805 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 SLC9A2Q9UBY0 812 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 CDC23Q9UJX2 597 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 KLK13Q9UKR3 277 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 IRAK3Q9Y616 596 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 BZW2Q9Y6E2 419 aaKnown RBP8.86□□□□□ -0.99
CD44-205ENST00000352818 SQORQ9Y6N5 450 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 MYO9AB2RTY4 2548 aa8.86□□□□□ -0.99
CD44-205ENST00000352818 CLUHO75153 1309 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 SFI1A8K8P3 1242 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 NT5C1B-RDH14C9J2C7 533 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 H0YCG3 227 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 ZNF263O14978 683 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 PMM2O15305 246 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 P4HA2O15460 535 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 HYAL3O43820 417 aaPredicted RBP8.85□□□□□ -0.99
CD44-205ENST00000352818 USO1O60763 962 aaKnown RBP8.85□□□□□ -0.99
CD44-205ENST00000352818 ATG7O95352 703 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 ZNF806P0C7X5 589 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 PON1P27169 355 aa8.85□□□□□ -0.99
CD44-205ENST00000352818 PRKCIP41743 596 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms