RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 LRMDAQ9H2I8 198 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 KIF9Q9HAQ2 790 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 RBAKQ9NYW8 714 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-202ENST00000352393 GRID1Q9ULK0 1009 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 PHTF1Q9UMS5 762 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 NUB1Q9Y5A7 615 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 KIF1CO43896 1103 aaKnown RBP25.91■■□□□ 1.74
CPNE1-202ENST00000352393 RGS20O76081 388 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 PIGRP01833 764 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 ETS1P14921 441 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 ATF7P17544 494 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-202ENST00000352393 ZNF132P52740 706 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 NOP14P78316 857 aaKnown RBP25.91■■□□□ 1.74
CPNE1-202ENST00000352393 GPS1Q13098 491 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 OASLQ15646 514 aaKnown RBP25.91■■□□□ 1.74
CPNE1-202ENST00000352393 PDK4Q16654 411 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 RNASEH2BQ5TBB1 312 aaKnown RBP25.91■■□□□ 1.74
CPNE1-202ENST00000352393 SPOCD1Q6ZMY3 1216 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 CGRRF1Q99675 332 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 ETNK1Q9HBU6 452 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 RNF146Q9NTX7 359 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 DRG1Q9Y295 367 aaKnown RBP25.91■■□□□ 1.74
CPNE1-202ENST00000352393 CTDP1Q9Y5B0 961 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-202ENST00000352393 USH1CQ9Y6N9 552 aa25.91■■□□□ 1.74
CPNE1-202ENST00000352393 POC1B-GALNT4F8VUJ3 575 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 RASA2Q15283 850 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 ERICH1Q86X53 443 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 UBR7Q8N806 425 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 RAB3IPQ96QF0 476 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-202ENST00000352393 JPH1Q9HDC5 661 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-202ENST00000352393 SHOC2Q9UQ13 582 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 CHKBQ9Y259 395 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 TCRBV5S1A1TA0A578 114 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 VCPP55072 806 aaKnown RBP25.9■■□□□ 1.74
CPNE1-202ENST00000352393 EMC2Q15006 297 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 ZBTB41Q5SVQ8 909 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 ERP27Q96DN0 273 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 THOC1Q96FV9 657 aaKnown RBP25.9■■□□□ 1.74
CPNE1-202ENST00000352393 PPCSQ9HAB8 311 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 RIPK3Q9Y572 518 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 IVNS1ABPQ9Y6Y0 642 aa25.9■■□□□ 1.74
CPNE1-202ENST00000352393 ALOX15BO15296 676 aa25.89■■□□□ 1.74
CPNE1-202ENST00000352393 EDF1O60869 148 aaKnown RBP25.89■■□□□ 1.74
CPNE1-202ENST00000352393 ATP11AP98196 1134 aa25.89■■□□□ 1.74
CPNE1-202ENST00000352393 PARP6Q2NL67 630 aa25.89■■□□□ 1.74
CPNE1-202ENST00000352393 NKD2Q969F2 451 aaPredicted RBP25.89■■□□□ 1.74
CPNE1-202ENST00000352393 WNK4Q96J92 1243 aa25.89■■□□□ 1.74
CPNE1-202ENST00000352393 SMC6Q96SB8 1091 aa25.89■■□□□ 1.74
CPNE1-202ENST00000352393 RPAP3Q9H6T3 665 aaPredicted RBP25.89■■□□□ 1.74
CPNE1-202ENST00000352393 hCG_1818297A0A087WSY0 165 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 VWA5AO00534 786 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 ATP5HO75947 161 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 SETDB1Q15047 1291 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 MTERF2Q49AM1 385 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 ABHD15Q6UXT9 468 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 ZNF570Q96NI8 536 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 SLCO1B3Q9NPD5 702 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 SLC9A2Q9UBY0 812 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 SLC24A2Q9UI40 661 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 RLFQ13129 1914 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 TYROBPO43914 113 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 KRT15P19012 456 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 RPA3P35244 121 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-202ENST00000352393 ACTR2P61160 394 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 ZNF772Q68DY9 489 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-202ENST00000352393 C4orf33Q8N1A6 199 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 OR5B17Q8NGF7 314 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 ZNF606Q8WXB4 792 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 ATG4CQ96DT6 458 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 ZBTB45Q96K62 511 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-202ENST00000352393 VPS37BQ9H9H4 285 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 PCDH9Q9HC56 1237 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 KCNG1Q9UIX4 513 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 SUFUQ9UMX1 484 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 CNTNAP2Q9UHC6 1331 aa25.88■■□□□ 1.73
CPNE1-202ENST00000352393 WNT10BO00744 389 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 DIAPH2O60879 1101 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 CALB1P05937 261 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 ITGAVP06756 1048 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 OGDHQ02218 1023 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 SP4Q02446 784 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 MTMR2Q13614 643 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 WDR72Q3MJ13 1102 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 XKR3Q5GH77 459 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 HP1BP3Q5SSJ5 553 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-202ENST00000352393 ZBED8Q8IZ13 594 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 AGBL3Q8NEM8 1001 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 ASAP3Q8TDY4 903 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 SLC1A5Q15758 541 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 ZFYVE27Q5T4F4 411 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 SLFN12LQ6IEE8 588 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 CENPUQ71F23 418 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 C10orf82Q8WW14 230 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 MCEEQ96PE7 176 aa25.87■■□□□ 1.73
CPNE1-202ENST00000352393 ZNF277Q9NRM2 450 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-202ENST00000352393 PSMC3IPQ9P2W1 217 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-202ENST00000352393 F8VP50 259 aa25.86■■□□□ 1.73
CPNE1-202ENST00000352393 NDC80O14777 642 aa25.86■■□□□ 1.73
CPNE1-202ENST00000352393 EFHC2Q5JST6 749 aa25.86■■□□□ 1.73
CPNE1-202ENST00000352393 TXNRD3NBQ6F5E7 133 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms