RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 C9orf72Q96LT7 481 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 ZCCHC17Q9NP64 241 aaKnown RBP14.41□□□□□ -0.1
SMC6-201ENST00000351948 ARHGAP20Q9P2F6 1191 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 SYNPO2Q9UMS6 1093 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 ABCC6O95255 1503 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 POU5F1BQ06416 359 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 MDH1BQ5I0G3 518 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 ACAD10Q6JQN1 1059 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 SEPT8Q92599 483 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 SNF8Q96H20 258 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 ACP6Q9NPH0 428 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 PDE4DIPQ5VU43 2346 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 SPDYE5A6NIY4 337 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 LACTBL1A8MY62 500 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 KRT37O76014 449 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 MAP2K5Q13163 448 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 PDCLQ13371 301 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 CTXN3Q4LDR2 81 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 RAB44Q7Z6P3 723 aaPredicted RBP14.41□□□□□ -0.1
SMC6-201ENST00000351948 RCOR2Q8IZ40 523 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 RAPGEF5Q92565 580 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 VPS39Q96JC1 886 aa14.41□□□□□ -0.1
SMC6-201ENST00000351948 KCPQ6ZWJ8 1503 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 IQANK1A0A1B0GTG1 560 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 UBA6A0AVT1 1052 aaPredicted RBP14.4□□□□□ -0.1
SMC6-201ENST00000351948 GRID2IPA4D2P6 1211 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 TBKBP1A7MCY6 615 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 ACKR2O00590 384 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
SMC6-201ENST00000351948 PRAMEP78395 509 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 CBWD6Q4V339 395 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 CBWD3Q5JTY5 395 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 FBXO47Q5MNV8 452 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 CBWD5Q5RIA9 395 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 JADE1Q6IE81 842 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 CHSY1Q86X52 802 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 ATL2Q8NHH9 583 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 SLC13A1Q9BZW2 595 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 GLRA2P23416 452 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 CASP2P42575 452 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 WDR49Q8IV35 697 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 SLITRK1Q96PX8 696 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 GAD1Q99259 594 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 COLEC11Q9BWP8 271 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 KRT82Q9NSB4 513 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 PPP1R12AO14974 1030 aaPredicted RBP14.4□□□□□ -0.1
SMC6-201ENST00000351948 BMP6P22004 513 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 MAGOHP61326 146 aaKnown RBP14.4□□□□□ -0.1
SMC6-201ENST00000351948 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.4□□□□□ -0.1
SMC6-201ENST00000351948 NOA1Q8NC60 698 aaKnown RBP14.4□□□□□ -0.1
SMC6-201ENST00000351948 ETNPPLQ8TBG4 499 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 TMC2Q8TDI7 906 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 ATG4AQ8WYN0 398 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 KAT5Q92993 513 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 LENG1Q96BZ8 264 aaPredicted RBP14.4□□□□□ -0.1
SMC6-201ENST00000351948 EPHB2P29323 1055 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 SERPINB6P35237 376 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 FAXCQ5TGI0 409 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 ALS2CLQ60I27 953 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 PPFIBP2Q8ND30 876 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 SPIRE2Q8WWL2 714 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 ZBTB10Q96DT7 871 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 DNAJC7Q99615 494 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 TMEM39AQ9NV64 488 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 LCMT1Q9UIC8 334 aa14.4□□□□□ -0.1
SMC6-201ENST00000351948 RBP3P10745 1247 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 C6orf118Q5T5N4 469 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 SLC27A1Q6PCB7 646 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 MUC3BQ9H195 1237 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 BTBD7Q9P203 1132 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 TRAF3IP3Q9Y228 551 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 AFDNP55196 1824 aaKnown RBP14.39□□□□□ -0.11
SMC6-201ENST00000351948 CCDC195A0A1B0GUA6 201 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 GOLGA8RI6L899 631 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 NOGQ13253 232 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 LRRC14Q15048 493 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 MMEL1Q495T6 779 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 NUGGCQ68CJ6 796 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 DDX53Q86TM3 631 aaKnown RBP14.39□□□□□ -0.11
SMC6-201ENST00000351948 FAM131BQ86XD5 332 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 MAML1Q92585 1016 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 ADAM2Q99965 735 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 GTF3C4Q9UKN8 822 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 COPEO14579 308 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 SPATA31C1P0DKV0 1188 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 ARHGAP25P42331 645 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 PTGER2P43116 358 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 ADCY2Q08462 1091 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 TAS2R42Q7RTR8 314 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 YAF2Q8IY57 180 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 TPCN2Q8NHX9 752 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 TACO1Q9BSH4 297 aaKnown RBP14.39□□□□□ -0.11
SMC6-201ENST00000351948 MMTAG2Q9BU76 263 aaKnown RBP14.39□□□□□ -0.11
SMC6-201ENST00000351948 INTS13Q9NVM9 706 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 LRRIQ3A6PVS8 624 aaPredicted RBP14.39□□□□□ -0.11
SMC6-201ENST00000351948 TADA3O75528 432 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 LIG3P49916 1009 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 CCL23P55773 120 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 INHBEP58166 350 aa14.39□□□□□ -0.11
SMC6-201ENST00000351948 TTC31Q49AM3 519 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms