RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 WDR72Q3MJ13 1102 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 TUBB8Q3ZCM7 444 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 CEP85LQ5SZL2 805 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 DNAJC24Q6P3W2 148 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 ZDHHC24Q6UX98 284 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 SYDE1Q6ZW31 735 aaPredicted RBP17.71■□□□□ 0.43
SAMM50-201ENST00000350028 KIAA0319LQ8IZA0 1049 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 WDTC1Q8N5D0 677 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 EXD1Q8NHP7 514 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 UBLCP1Q8WVY7 318 aaPredicted RBP17.71■□□□□ 0.43
SAMM50-201ENST00000350028 SCLT1Q96NL6 688 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 PPP1R16BQ96T49 567 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 TMBIM4Q9HC24 238 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 GRHL1Q9NZI5 618 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 FEZ2Q9UHY8 353 aaPredicted RBP17.71■□□□□ 0.43
SAMM50-201ENST00000350028 STRIP2Q9ULQ0 834 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 NFS1Q9Y697 457 aa17.71■□□□□ 0.43
SAMM50-201ENST00000350028 A0A1B0GUA9 196 aa17.7■□□□□ 0.42
SAMM50-201ENST00000350028 HMGB1P1B2RPK0 211 aaPredicted RBP17.7■□□□□ 0.42
SAMM50-201ENST00000350028 MEFVO15553 781 aaPredicted RBP17.7■□□□□ 0.42
SAMM50-201ENST00000350028 ITGB3P05106 788 aa17.7■□□□□ 0.42
SAMM50-201ENST00000350028 POLR2BP30876 1174 aaKnown RBP17.7■□□□□ 0.42
SAMM50-201ENST00000350028 TAS2R40P59535 323 aa17.7■□□□□ 0.42
SAMM50-201ENST00000350028 SKOR1P84550 965 aa17.7■□□□□ 0.42
SAMM50-201ENST00000350028 RUFY4Q6ZNE9 571 aa17.7■□□□□ 0.42
SAMM50-201ENST00000350028 APBB1IPQ7Z5R6 666 aaPredicted RBP17.7■□□□□ 0.42
SAMM50-201ENST00000350028 CXorf38Q8TB03 319 aa17.7■□□□□ 0.42
SAMM50-201ENST00000350028 ACAP3Q96P50 834 aa17.7■□□□□ 0.42
SAMM50-201ENST00000350028 ZMYND15Q9H091 742 aa17.7■□□□□ 0.42
SAMM50-201ENST00000350028 FAM124BQ9H5Z6 455 aaPredicted RBP17.7■□□□□ 0.42
SAMM50-201ENST00000350028 MTRF1LQ9UGC7 380 aaKnown RBP17.7■□□□□ 0.42
SAMM50-201ENST00000350028 KAT6AQ92794 2004 aa17.7■□□□□ 0.42
SAMM50-201ENST00000350028 CD19P15391 556 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 RPL21P46778 160 aaKnown RBP17.69■□□□□ 0.42
SAMM50-201ENST00000350028 PLTPP55058 493 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 TMEM132DQ14C87 1099 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 LRRC38Q5VT99 294 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 GRK7Q8WTQ7 553 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 ATP6V1G3Q96LB4 118 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 USTQ9Y2C2 406 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 C2CD2Q9Y426 696 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 SHOX2O60902 331 aaPredicted RBP17.69■□□□□ 0.42
SAMM50-201ENST00000350028 STAU1O95793 577 aaKnown RBP17.69■□□□□ 0.42
SAMM50-201ENST00000350028 GRM5P41594 1212 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 SSR1P43307 286 aaKnown RBP17.69■□□□□ 0.42
SAMM50-201ENST00000350028 KCNJ1P48048 391 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 RAD23BP54727 409 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 EIF3BP55884 814 aaKnown RBP17.69■□□□□ 0.42
SAMM50-201ENST00000350028 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
SAMM50-201ENST00000350028 DCAF4L1Q3SXM0 396 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 PPP1R15BQ5SWA1 713 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 EMC10Q5UCC4 262 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 DENND1BQ6P3S1 775 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 DCUN1D2Q6PH85 259 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 CCDC50Q8IVM0 306 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 RCOR2Q8IZ40 523 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 TTC39CQ8N584 583 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 C3orf20Q8ND61 904 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 C1orf54Q8WWF1 131 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 DCLK3Q9C098 648 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 SDCBP2Q9H190 292 aa17.69■□□□□ 0.42
SAMM50-201ENST00000350028 MYZAPP0CAP1 466 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 RAP1GAPP47736 663 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 RPL7AP62424 266 aaKnown RBP17.68■□□□□ 0.42
SAMM50-201ENST00000350028 RBP5P82980 135 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 MAP2K5Q13163 448 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 PPP1R7Q15435 360 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 ZNF784Q8NCA9 323 aaPredicted RBP17.68■□□□□ 0.42
SAMM50-201ENST00000350028 FBXO25Q8TCJ0 367 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 ART4Q93070 314 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 RBM41Q96IZ5 413 aaKnown RBP17.68■□□□□ 0.42
SAMM50-201ENST00000350028 OSBPL8Q9BZF1 889 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 WDR35Q9P2L0 1181 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 ATP8A1Q9Y2Q0 1164 aa17.68■□□□□ 0.42
SAMM50-201ENST00000350028 A6NJR5 290 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 DYNC1LI2O43237 492 aaPredicted RBP17.67■□□□□ 0.42
SAMM50-201ENST00000350028 CILPO75339 1184 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 GJB6O95452 261 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 RALAP11233 206 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 PMS2P54278 862 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 CDH8P55286 799 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 ZNF844Q08AG5 666 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 KLF1Q13351 362 aaPredicted RBP17.67■□□□□ 0.42
SAMM50-201ENST00000350028 CCNG2Q16589 344 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 MORN1Q5T089 497 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 AGBL2Q5U5Z8 902 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 KDM7AQ6ZMT4 941 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 NIPA2Q8N8Q9 360 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 ATL2Q8NHH9 583 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 TMEM176AQ96HP8 235 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 HPDLQ96IR7 371 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 MCEEQ96PE7 176 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 CAPS2Q9BXY5 557 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 GCOM2Q9BZD3 368 aaPredicted RBP17.67■□□□□ 0.42
SAMM50-201ENST00000350028 ADAMTS10Q9H324 1103 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 PLEKHA5Q9HAU0 1116 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 SETD4Q9NVD3 440 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 WHRNQ9P202 907 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 AGAP1Q9UPQ3 857 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms