RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 VTA1Q9NP79 307 aa11.21□□□□□ -0.62
CAPN3-203ENST00000349748 RSL24D1Q9UHA3 163 aaKnown RBP11.21□□□□□ -0.62
CAPN3-203ENST00000349748 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.62
CAPN3-203ENST00000349748 IGSF9BQ9UPX0 1349 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 PODXLO00592 558 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 CNOT3O75175 753 aaKnown RBP11.2□□□□□ -0.62
CAPN3-203ENST00000349748 CDH16O75309 829 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 TRPA1O75762 1119 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 S100BP04271 92 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-203ENST00000349748 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-203ENST00000349748 CA4P22748 312 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 CIITAP33076 1130 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 PSMD6Q15008 389 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 SPOPLQ6IQ16 392 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 AMIGO2Q86SJ2 522 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 LZTR1Q8N653 840 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 SLC26A7Q8TE54 656 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 ITPKCQ96DU7 683 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 ANKRD36BP1Q96IX9 119 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 RBM15Q96T37 977 aaKnown RBP eCLIP11.2□□□□□ -0.62
CAPN3-203ENST00000349748 MRPS26Q9BYN8 205 aaKnown RBP11.2□□□□□ -0.62
CAPN3-203ENST00000349748 PIH1D3Q9NQM4 214 aaKnown RBP11.2□□□□□ -0.62
CAPN3-203ENST00000349748 MAN1C1Q9NR34 630 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 TBC1D23Q9NUY8 699 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 ANKFY1Q9P2R3 1169 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 PCDHA4Q9UN74 947 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 RIC1Q4ADV7 1423 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 TMX2-CTNND1H3BSU7 103 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 TNFRSF10AO00220 468 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 ITM2AO43736 263 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 APOEP02649 317 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 THRAP10827 490 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 CHRNA3P32297 505 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 MYBPC1Q00872 1141 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 NR1H3Q13133 447 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 PDAP1Q13442 181 aaKnown RBP11.2□□□□□ -0.62
CAPN3-203ENST00000349748 TRIP13Q15645 432 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-203ENST00000349748 KCNJ8Q15842 424 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 PPP2R5EQ16537 467 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 DYMQ7RTS9 669 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 SLC35G2Q8TBE7 412 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
CAPN3-203ENST00000349748 C9orf72Q96LT7 481 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 DCUN1D5Q9BTE7 237 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 OSBPL8Q9BZF1 889 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 NMUR2Q9GZQ4 415 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 LRRC4BQ9NT99 713 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 NINJ2Q9NZG7 142 aa11.2□□□□□ -0.62
CAPN3-203ENST00000349748 ZMYM2Q9UBW7 1377 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 RSPH10B2B2RC85 870 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 MAGEC1O60732 1142 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 TPPPO94811 219 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 SORBS2O94875 1100 aaKnown RBP11.19□□□□□ -0.62
CAPN3-203ENST00000349748 ZBTB11O95625 1053 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-203ENST00000349748 RSPH10BP0C881 870 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 GALCP54803 685 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 RASA2Q15283 850 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 MFSD6Q6ZSS7 791 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 ALYREFQ86V81 257 aaKnown RBP11.19□□□□□ -0.62
CAPN3-203ENST00000349748 ICA1LQ8NDH6 482 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-203ENST00000349748 RAB3IL1Q8TBN0 382 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 KRT35Q92764 455 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 RETREG1Q9H6L5 497 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 EPB41L4AQ9HCS5 686 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-203ENST00000349748 AASDHPPTQ9NRN7 309 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 MKS1Q9NXB0 559 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 LGALS13Q9UHV8 139 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 TLL2Q9Y6L7 1015 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 BRWD3Q6RI45 1802 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 FCHO1O14526 889 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 KDM1AO60341 852 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 KCNA2P16389 499 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 ADD2P35612 726 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 GSSP48637 474 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 CYP2A13Q16696 494 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 PHKG1Q16816 387 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 C10orf76Q5T2E6 689 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 MAP3K21Q5TCX8 1036 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 ZBTB46Q86UZ6 589 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 ALDH16A1Q8IZ83 802 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 SPATA5Q8NB90 893 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 GSDMBQ8TAX9 411 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 SKA1Q96BD8 255 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 TUBB6Q9BUF5 446 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 TMEM120AQ9BXJ8 343 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 GANQ9H2C0 597 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 TRABDQ9H4I3 376 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 DNAJB4Q9UDY4 337 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 PCYOX1Q9UHG3 505 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 MOSPD1Q9UJG1 213 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 EMSYQ7Z589 1322 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 MEI4A8MW99 385 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 TM7SF2O76062 418 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 CD48P09326 243 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 FDFT1P37268 417 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 PCYT1AP49585 367 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms