RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 ATP1A2P50993 1020 aa14.29□□□□□ -0.12
UBA3-201ENST00000349511 PDCLQ13371 301 aa14.29□□□□□ -0.12
UBA3-201ENST00000349511 UBXN11Q5T124 520 aa14.29□□□□□ -0.12
UBA3-201ENST00000349511 SLC30A5Q8TAD4 765 aa14.29□□□□□ -0.12
UBA3-201ENST00000349511 PPM1EQ8WY54 764 aa14.29□□□□□ -0.12
UBA3-201ENST00000349511 PBKQ96KB5 322 aa14.29□□□□□ -0.12
UBA3-201ENST00000349511 AGO3Q9H9G7 860 aaKnown RBP14.29□□□□□ -0.12
UBA3-201ENST00000349511 A0A1W2PQ45 241 aaPredicted RBP14.28□□□□□ -0.12
UBA3-201ENST00000349511 A0A1W2PQY0 241 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 A6NNZ2 444 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 MEIS3P2A8K0S8 358 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 VGLL3A8MV65 326 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 GHRP10912 638 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 CHRNB2P17787 502 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 POLR2BP30876 1174 aaKnown RBP14.28□□□□□ -0.12
UBA3-201ENST00000349511 PDE6CP51160 858 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 IFI16Q16666 785 aaKnown RBP14.28□□□□□ -0.12
UBA3-201ENST00000349511 PTPROQ16827 1216 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 SGSM1Q2NKQ1 1148 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 WDR72Q3MJ13 1102 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 TUBB8Q3ZCM7 444 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 TTC31Q49AM3 519 aaPredicted RBP14.28□□□□□ -0.12
UBA3-201ENST00000349511 KDM7AQ6ZMT4 941 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 PACS2Q86VP3 889 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 LRRC57Q8N9N7 239 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 C18orf25Q96B23 403 aaPredicted RBP14.28□□□□□ -0.12
UBA3-201ENST00000349511 PCDHB18PQ96TA0 734 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 SENP6Q9GZR1 1112 aaPredicted RBP14.28□□□□□ -0.12
UBA3-201ENST00000349511 FAM107BQ9H098 131 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.28□□□□□ -0.12
UBA3-201ENST00000349511 XYLT2Q9H1B5 865 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 ASB7Q9H672 318 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 STARD7Q9NQZ5 370 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 CHORDC1Q9UHD1 332 aaPredicted RBP14.28□□□□□ -0.12
UBA3-201ENST00000349511 DAAM1Q9Y4D1 1078 aa14.28□□□□□ -0.12
UBA3-201ENST00000349511 A0A087WUV0 522 aaPredicted RBP14.27□□□□□ -0.12
UBA3-201ENST00000349511 CEP104O60308 925 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 ACO1P21399 889 aaKnown RBP14.27□□□□□ -0.12
UBA3-201ENST00000349511 CD52P31358 61 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.12
UBA3-201ENST00000349511 CDH8P55286 799 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 SESTD1Q86VW0 696 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 ACTRT1Q8TDG2 376 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 RNPC3Q96LT9 517 aaKnown RBP14.27□□□□□ -0.12
UBA3-201ENST00000349511 DEFB118Q96PH6 123 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 ISCUQ9H1K1 167 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 NOCTQ9UK39 431 aaKnown RBP14.27□□□□□ -0.12
UBA3-201ENST00000349511 NENFQ9UMX5 172 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 AGAP1Q9UPQ3 857 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 IPPQ9Y573 584 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 FAM169AQ9Y6X4 670 aa14.27□□□□□ -0.12
UBA3-201ENST00000349511 CFHP08603 1231 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 AXLP30530 894 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 HSPA9P38646 679 aaKnown RBP14.27□□□□□ -0.13
UBA3-201ENST00000349511 GALCP54803 685 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 MGAT3Q09327 533 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 ORC1Q13415 861 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 ENOSF1Q7L5Y1 443 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 ARRDC4Q8NCT1 418 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 TPCN2Q8NHX9 752 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 SNX27Q96L92 541 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 DPP3Q9NY33 737 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 TUBGCP4Q9UGJ1 667 aa14.27□□□□□ -0.13
UBA3-201ENST00000349511 MOXD2PA6NHM9 499 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 PPEF2O14830 753 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 ECHS1P30084 290 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 FMO1Q01740 532 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 PCBP1Q15365 356 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBA3-201ENST00000349511 KYAT1Q16773 422 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 ZNF618Q5T7W0 954 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 TADA2BQ86TJ2 420 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 FMNL3Q8IVF7 1028 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 SMG8Q8ND04 991 aaKnown RBP14.26□□□□□ -0.13
UBA3-201ENST00000349511 CXorf38Q8TB03 319 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 AP1M1Q9BXS5 423 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 GOLGA2P5Q9HBQ8 144 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 PLAAQ9Y263 795 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 PTPN22Q9Y2R2 807 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 LAMA2P24043 3122 aaKnown RBP14.26□□□□□ -0.13
UBA3-201ENST00000349511 SCN1AP35498 2009 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 CABYRO75952 493 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 H2AFZP0C0S5 128 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 TBXAS1P24557 533 aaPredicted RBP14.26□□□□□ -0.13
UBA3-201ENST00000349511 PRMT2P55345 433 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 HLTFQ14527 1009 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBA3-201ENST00000349511 EMC10Q5UCC4 262 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 H2AFVQ71UI9 128 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 PASD1Q8IV76 773 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 RBBP8NLQ8NC74 664 aaPredicted RBP14.26□□□□□ -0.13
UBA3-201ENST00000349511 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBA3-201ENST00000349511 DDX1Q92499 740 aaKnown RBP14.26□□□□□ -0.13
UBA3-201ENST00000349511 LPPQ93052 612 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 ATP6V1G3Q96LB4 118 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 ZFP42Q96MM3 310 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 NIF3L1Q9GZT8 377 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 THAP2Q9H0W7 228 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 RNF208Q9H0X6 261 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 CISHQ9NSE2 258 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 PADI3Q9ULW8 664 aa14.26□□□□□ -0.13
UBA3-201ENST00000349511 STXBP5LQ9Y2K9 1186 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms