RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 HEY2Q9UBP5 337 aa19.69■□□□□ 0.74
SCARF1-202ENST00000348987 SEL1LQ9UBV2 794 aa19.69■□□□□ 0.74
SCARF1-202ENST00000348987 ZNF212Q9UDV6 495 aa19.69■□□□□ 0.74
SCARF1-202ENST00000348987 ZBTB21Q9ULJ3 1066 aa19.69■□□□□ 0.74
SCARF1-202ENST00000348987 MTA2O94776 668 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 HAUS5O94927 633 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 ZWINTO95229 277 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 GSTA3Q16772 222 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 IZUMO3Q5VZ72 239 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 PADI6Q6TGC4 694 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 LDHDQ86WU2 507 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 RIBC1Q8N443 379 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-202ENST00000348987 PLEKHO2Q8TD55 490 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 RANBP17Q9H2T7 1088 aaKnown RBP19.68■□□□□ 0.74
SCARF1-202ENST00000348987 PREBQ9HCU5 417 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 TAS2R1Q9NYW7 299 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 ATXN10Q9UBB4 475 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 SPATA31D3P0C874 917 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 AMPD1P23109 780 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 SPATA31D4Q6ZUB0 917 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 ARHGAP18Q8N392 663 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 PDCD7Q8N8D1 485 aaKnown RBP19.68■□□□□ 0.74
SCARF1-202ENST00000348987 NSL1Q96IY1 281 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 NR1H4Q96RI1 486 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-202ENST00000348987 WDR11Q9BZH6 1224 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 DCLK3Q9C098 648 aa19.68■□□□□ 0.74
SCARF1-202ENST00000348987 ASCC2Q9H1I8 757 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-202ENST00000348987 FBXO6Q9NRD1 293 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-202ENST00000348987 SMG5Q9UPR3 1016 aaKnown RBP19.68■□□□□ 0.74
SCARF1-202ENST00000348987 PDLIM1O00151 329 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 CETN2P41208 172 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 NR1H3Q13133 447 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 C1orf220Q5T0J3 134 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 GRK7Q8WTQ7 553 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 NCSTNQ92542 709 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 ZNF653Q96CK0 615 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 HEMGNQ9BXL5 484 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 TMEM39BQ9GZU3 492 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 PIK3CAP42336 1068 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 SYDE1Q6ZW31 735 aaPredicted RBP19.67■□□□□ 0.74
SCARF1-202ENST00000348987 NOP9Q86U38 636 aaKnown RBP19.67■□□□□ 0.74
SCARF1-202ENST00000348987 PLVAPQ9BX97 442 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 TEKT3Q9BXF9 490 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 SAYSD1Q9NPB0 183 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 KCNH7Q9NS40 1196 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 ANKFY1Q9P2R3 1169 aa19.67■□□□□ 0.74
SCARF1-202ENST00000348987 TROVE2P10155 538 aaKnown RBP eCLIP19.66■□□□□ 0.74
SCARF1-202ENST00000348987 MYBPC3Q14896 1274 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 LIN52Q52LA3 116 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 IZUMO2Q6UXV1 221 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 GPRC5CQ9NQ84 441 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 DDX43Q9NXZ2 648 aaKnown RBP19.66■□□□□ 0.74
SCARF1-202ENST00000348987 GALNT8Q9NY28 637 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 NFIBO00712 420 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 TYROBPO43914 113 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 SPP2Q13103 211 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 PCNX4Q63HM2 1172 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 ZNF365Q70YC5 407 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 KCTD17Q8N5Z5 321 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 CFAP57Q96MR6 1250 aa19.66■□□□□ 0.74
SCARF1-202ENST00000348987 MAK16Q9BXY0 300 aaKnown RBP19.66■□□□□ 0.74
SCARF1-202ENST00000348987 C12orf65Q9H3J6 166 aaKnown RBP19.66■□□□□ 0.74
SCARF1-202ENST00000348987 HERC5Q9UII4 1024 aaKnown RBP19.66■□□□□ 0.74
SCARF1-202ENST00000348987 SERPINB3P29508 390 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 SLC18A1P54219 525 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 DGKZQ13574 1117 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 FASTKD3Q14CZ7 662 aaKnown RBP19.65■□□□□ 0.74
SCARF1-202ENST00000348987 EPS8L1Q8TE68 723 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 LARSQ9P2J5 1176 aaKnown RBP19.65■□□□□ 0.74
SCARF1-202ENST00000348987 ZHX2Q9Y6X8 837 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 RBBP6Q7Z6E9 1792 aaKnown RBP19.65■□□□□ 0.74
SCARF1-202ENST00000348987 UMODL1Q5DID0 1318 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 GOLGA8IPA6NC78 632 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 SPDYE2BA6NHP3 402 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 GOLGA8JA6NMD2 632 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 SPDYE6P0CI01 402 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 PLS3P13797 630 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 ADRA1DP25100 572 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 CCNFP41002 786 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 STXBP4Q6ZWJ1 553 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 MXRA8Q9BRK3 442 aa19.65■□□□□ 0.74
SCARF1-202ENST00000348987 DNAAF2Q9NVR5 837 aaKnown RBP19.65■□□□□ 0.74
SCARF1-202ENST00000348987 MRPL11Q9Y3B7 192 aaKnown RBP19.65■□□□□ 0.74
SCARF1-202ENST00000348987 CYP1A2P05177 515 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 KRT4P19013 534 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 MAN1A1P33908 653 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 VAMP7P51809 220 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 SLC47A2Q86VL8 602 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 RELL1Q8IUW5 271 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 SLC9A9Q8IVB4 645 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 HAPLN3Q96S86 360 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 ALG13Q9NP73 1137 aaKnown RBP19.64■□□□□ 0.73
SCARF1-202ENST00000348987 NEU2Q9Y3R4 380 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 SLC4A7Q9Y6M7 1214 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.64■□□□□ 0.73
SCARF1-202ENST00000348987 DHX15O43143 795 aaKnown RBP19.64■□□□□ 0.73
SCARF1-202ENST00000348987 ABHD2P08910 425 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 ESRRAP11474 423 aaPredicted RBP19.64■□□□□ 0.73
SCARF1-202ENST00000348987 ZBTB16Q05516 673 aa19.64■□□□□ 0.73
SCARF1-202ENST00000348987 LSAMPQ13449 338 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms