RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 C1orf228Q6PIY5 440 aa15.49■□□□□ 0.07
NUP50-201ENST00000347635 LNX1Q8TBB1 728 aaPredicted RBP15.49■□□□□ 0.07
NUP50-201ENST00000347635 BAZ2BQ9UIF8 2168 aaKnown RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 GAS2O43903 313 aaKnown RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 GPC4O75487 556 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 ARP10275 920 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 MX2P20592 715 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 EPHB1P54762 984 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 ZNF200P98182 395 aaPredicted RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 ART3Q13508 389 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 NCOA4Q13772 614 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 IRF2BP2Q7Z5L9 587 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 ARHGAP18Q8N392 663 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 HES6Q96HZ4 224 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 BCAR1P56945 870 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 DYNC1I2Q13409 638 aaKnown RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 RPS6KA2Q15349 733 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 DUOXA2Q1HG44 320 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 CBWD6Q4V339 395 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 CBWD3Q5JTY5 395 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 CBWD5Q5RIA9 395 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 FAM102AQ5T9C2 384 aaPredicted RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 PPIL6Q8IXY8 311 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 DDX27Q96GQ7 796 aaKnown RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 KIFC3Q9BVG8 833 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 G3BP2Q9UN86 482 aaKnown RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 PCDHA3Q9Y5H8 950 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 ASTN1O14525 1302 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 IGSF9BQ9UPX0 1349 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 CFLARO15519 480 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 RARAP10276 462 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 KRT4P19013 534 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 ALDH18A1P54886 795 aaKnown RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 KDSRQ06136 332 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 LRRC23Q53EV4 343 aaPredicted RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 SWT1Q5T5J6 900 aaKnown RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 NBPF12Q5TAG4 269 aaPredicted RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 MAGED2Q9UNF1 606 aaPredicted RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 GTF2H1P32780 548 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 FCGRTP55899 365 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 NSL1Q96IY1 281 aa15.48■□□□□ 0.07
NUP50-201ENST00000347635 KLF6Q99612 283 aaPredicted RBP15.48■□□□□ 0.07
NUP50-201ENST00000347635 SMAPO00193 183 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
NUP50-201ENST00000347635 TRPA1O75762 1119 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 ALDH1A1P00352 501 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 SRGAP2BP0DMP2 458 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 RPS6P62753 249 aaKnown RBP15.47■□□□□ 0.07
NUP50-201ENST00000347635 ECM1Q16610 540 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 CLEC16AQ2KHT3 1053 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 CDKL3Q8IVW4 592 aaPredicted RBP15.47■□□□□ 0.07
NUP50-201ENST00000347635 CCDC97Q96F63 343 aaPredicted RBP15.47■□□□□ 0.07
NUP50-201ENST00000347635 STAMBPL1Q96FJ0 436 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 FAF1Q9UNN5 650 aaPredicted RBP15.47■□□□□ 0.07
NUP50-201ENST00000347635 CHMP2BQ9UQN3 213 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 NAALADL1Q9UQQ1 740 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 BCL9LQ86UU0 1499 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 ENO4A6NNW6 628 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 SLITRK3O94933 977 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 PREPLQ4J6C6 727 aaPredicted RBP15.47■□□□□ 0.07
NUP50-201ENST00000347635 KIAA1841Q6NSI8 718 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 SALL4Q9UJQ4 1053 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 TLR2O60603 784 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 PFDN1O60925 122 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 DDNO94850 711 aaPredicted RBP15.47■□□□□ 0.07
NUP50-201ENST00000347635 CIITAP33076 1130 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 HIC1Q14526 733 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 DNAL1Q4LDG9 190 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 MDH1BQ5I0G3 518 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 ZNF572Q7Z3I7 529 aaPredicted RBP15.47■□□□□ 0.07
NUP50-201ENST00000347635 PIP4K2CQ8TBX8 421 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 OLFM3Q96PB7 478 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 RRN3P2A6NIE6 340 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 DRD4P21917 467 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 SDC4P31431 198 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 KCNA1Q09470 495 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 CCNG2Q16589 344 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 DSTYKQ6XUX3 929 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 NLRP9Q7RTR0 991 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 CYP2W1Q8TAV3 490 aa15.47■□□□□ 0.07
NUP50-201ENST00000347635 FRMPD4Q14CM0 1322 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 NUDT17P0C025 328 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 RGS2P41220 211 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 SYCP2LQ5T4T6 812 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 TWF2Q6IBS0 349 aaKnown RBP15.46■□□□□ 0.07
NUP50-201ENST00000347635 SPOPLQ6IQ16 392 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 DCLK3Q9C098 648 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 C17orf75Q9HAS0 396 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 GPRC5CQ9NQ84 441 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 TBC1D12O60347 775 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 HBP1O60381 514 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 VCAM1P19320 739 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 VHLP40337 213 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 AADACL2Q6P093 401 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 POTEAQ6S8J7 498 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 THEM5Q8N1Q8 247 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 C1orf131Q8NDD1 294 aaKnown RBP15.46■□□□□ 0.07
NUP50-201ENST00000347635 URGCPQ8TCY9 931 aa15.46■□□□□ 0.07
NUP50-201ENST00000347635 SLC26A7Q8TE54 656 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms