RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 KIF4AO95239 1232 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 VDRP11473 427 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 CDH5P33151 784 aaPredicted RBP22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 MLH1P40692 756 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 TAF6P49848 677 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 NDST1P52848 882 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 C1QBPQ07021 282 aaKnown RBP22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 MTFR1Q15390 333 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 NT5DC3Q86UY8 548 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 ZNF564Q8TBZ8 553 aaPredicted RBP22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 UBE2Q2Q8WVN8 375 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 UBXN4Q92575 508 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 GOLGA1Q92805 767 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 CAPZA3Q96KX2 299 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 TWNKQ96RR1 684 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 ADAM2Q99965 735 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 RNF208Q9H0X6 261 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 LHX5Q9H2C1 402 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 GDAP2Q9NXN4 497 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 ADAM22Q9P0K1 906 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 HMGXB4Q9UGU5 601 aa22.83■■□□□ 1.25
TSPAN3-202ENST00000346495 MEIS3P2A8K0S8 358 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 ZNF185O15231 689 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 TFRCP02786 760 aaKnown RBP22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 AGMOQ6ZNB7 445 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 COG1Q8WTW3 980 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 LPPQ93052 612 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 RPGRIP1Q96KN7 1286 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 GAD1Q99259 594 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 NT5C1AQ9BXI3 368 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 GOLPH3Q9H4A6 298 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 UBN1Q9NPG3 1134 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 RNF14Q9UBS8 474 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 PACSIN2Q9UNF0 486 aaPredicted RBP22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 KPNA7A9QM74 516 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 CES2O00748 559 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 MYCP01106 439 aaPredicted RBP22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 THP07101 528 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 CREG2Q8IUH2 290 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 TSC1Q92574 1164 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 PSMB7Q99436 277 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 C11orf70Q9BRQ4 267 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 GOLGA2P5Q9HBQ8 144 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 V9GYY5 206 aaPredicted RBP22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 HTTP42858 3142 aa22.82■■□□□ 1.24
TSPAN3-202ENST00000346495 ARL5CA6NH57 179 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 MMP8P22894 467 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 RRM1P23921 792 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 CXCR5P32302 372 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 PTP4A2Q12974 167 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 BFSP2Q13515 415 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 RSRC2Q7L4I2 434 aaKnown RBP22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 UNC93AQ86WB7 457 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 FAM126BQ8IXS8 530 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 C1orf131Q8NDD1 294 aaKnown RBP22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 GSTCDQ8NEC7 633 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 HEXIM2Q96MH2 286 aaKnown RBP22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 MRPL45Q9BRJ2 306 aaKnown RBP22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 RSAD1Q9HA92 442 aa22.81■■□□□ 1.24
TSPAN3-202ENST00000346495 CALB1P05937 261 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 SELPP16109 830 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 ORC1Q13415 861 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 NAA30Q147X3 362 aaPredicted RBP22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 CNGA2Q16280 664 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 ERCC6LQ2NKX8 1250 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 SGO2Q562F6 1265 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 CCDC181Q5TID7 509 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 DENND1BQ6P3S1 775 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 MMS22LQ6ZRQ5 1243 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 LRRC8DQ7L1W4 858 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 HES6Q96HZ4 224 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 PBKQ96KB5 322 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 DNAI2Q9GZS0 605 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 MRPL47Q9HD33 250 aaKnown RBP22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 CHORDC1Q9UHD1 332 aaPredicted RBP22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 ALG6Q9Y672 507 aa22.8■■□□□ 1.24
TSPAN3-202ENST00000346495 PAFAH1B1P43034 410 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 MESDQ14696 234 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 MBTPS1Q14703 1052 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 STILQ15468 1287 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 SOWAHAQ2M3V2 549 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 ECHDC2Q86YB7 292 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 TSPYL2Q9H2G4 693 aaPredicted RBP22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 RGS18Q9NS28 235 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 SCINQ9Y6U3 715 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 CENPFP49454 3210 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 SPTLC1O15269 473 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 DNA2P51530 1060 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 LILRA4P59901 499 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 TEX35Q5T0J7 233 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 ZNF572Q7Z3I7 529 aaPredicted RBP22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 WDTC1Q8N5D0 677 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 RNF169Q8NCN4 708 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 OR6B3Q8NGW1 331 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 SELENOOQ9BVL4 669 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 MIOSQ9NXC5 875 aa22.79■■□□□ 1.24
TSPAN3-202ENST00000346495 TMEM110-MUSTN1A8MSY1 372 aa22.78■■□□□ 1.24
TSPAN3-202ENST00000346495 O00370 1275 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms