RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RXFP1Q9HBX9 757 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 ANK1P16157 1881 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 PDCD11Q14690 1871 aaKnown RBP12.7□□□□□ -0.38
SNCA-202ENST00000345009 KIAA1671Q9BY89 1806 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 OR6C75A6NL08 312 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 HIDE1A8MVS5 230 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 PPEF2O14830 753 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 SPTLC1O15269 473 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 PMM2O15305 246 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 LILRB3O75022 631 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 HLA-DRAP01903 254 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 AFPP02771 609 aaKnown RBP12.7□□□□□ -0.38
SNCA-202ENST00000345009 CYP11A1P05108 521 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 CNPP09543 421 aaKnown RBP12.7□□□□□ -0.38
SNCA-202ENST00000345009 CDK11BP21127 795 aaKnown RBP12.7□□□□□ -0.38
SNCA-202ENST00000345009 LHX1P48742 406 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 ZNF165P49910 485 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 MYL6P60660 151 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 PPP3CAQ08209 521 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 KCNH2Q12809 1159 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 CCDC85BQ15834 202 aaPredicted RBP12.7□□□□□ -0.38
SNCA-202ENST00000345009 DUSP6Q16828 381 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 CTXN3Q4LDR2 81 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 RTP2Q5QGT7 225 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 C1orf220Q5T0J3 134 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 C15orf39Q6ZRI6 1047 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 MAFAQ8NHW3 353 aaPredicted RBP12.7□□□□□ -0.38
SNCA-202ENST00000345009 CXorf38Q8TB03 319 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 LNX1Q8TBB1 728 aaPredicted RBP12.7□□□□□ -0.38
SNCA-202ENST00000345009 AUTS2Q8WXX7 1259 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 PPM1EQ8WY54 764 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 SLC35C1Q96A29 364 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 FAXDC2Q96IV6 333 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 B3GALT6Q96L58 329 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 IGFLR1Q9H665 355 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 VRTNQ9H8Y1 702 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 RAB20Q9NX57 234 aa12.7□□□□□ -0.38
SNCA-202ENST00000345009 KCNJ18B7U540 433 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 TK2O00142 265 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 PER2O15055 1255 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 TEX28O15482 410 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 GLUD1P00367 558 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 ASS1P00966 412 aaKnown RBP12.69□□□□□ -0.38
SNCA-202ENST00000345009 PCSK1P29120 753 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 FMO5P49326 533 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 MYL7Q01449 175 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 SMARCB1Q12824 385 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 MRPL58Q14197 206 aaKnown RBP12.69□□□□□ -0.38
SNCA-202ENST00000345009 KCNJ12Q14500 433 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 PRSS55Q6UWB4 352 aaPredicted RBP12.69□□□□□ -0.38
SNCA-202ENST00000345009 EP400NLQ6ZTU2 488 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 C11orf57Q6ZUT1 292 aaPredicted RBP12.69□□□□□ -0.38
SNCA-202ENST00000345009 TTC39CQ8N584 583 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 EFHBQ8N7U6 833 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 CASP10Q92851 521 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 KLHL5Q96PQ7 755 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 MED15Q96RN5 788 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 TUBGCP2Q9BSJ2 902 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 SNX25Q9H3E2 840 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 MTRRQ9UBK8 725 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 NXF1Q9UBU9 619 aaKnown RBP12.69□□□□□ -0.38
SNCA-202ENST00000345009 MAFFQ9ULX9 164 aa12.69□□□□□ -0.38
SNCA-202ENST00000345009 TIMM13Q9Y5L4 95 aaPredicted RBP12.69□□□□□ -0.38
SNCA-202ENST00000345009 SCN1AP35498 2009 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 PES1O00541 588 aaKnown RBP12.68□□□□□ -0.38
SNCA-202ENST00000345009 CLASP2O75122 1294 aaKnown RBP12.68□□□□□ -0.38
SNCA-202ENST00000345009 IGFBP6P24592 240 aaPredicted RBP12.68□□□□□ -0.38
SNCA-202ENST00000345009 ELF1P32519 619 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 OR1D2P34982 312 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 GNL1P36915 607 aaPredicted RBP12.68□□□□□ -0.38
SNCA-202ENST00000345009 TSPY1Q01534 308 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 HYAL1Q12794 435 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 MAN2A1Q16706 1144 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 TCP11X2Q5H9J9 407 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 WSCD1Q658N2 575 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 TPGS2Q68CL5 300 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 RTL10Q7L3V2 364 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 IRF2BP1Q8IU81 584 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 DCP1BQ8IZD4 617 aaKnown RBP12.68□□□□□ -0.38
SNCA-202ENST00000345009 ADGRF2Q8IZF7 708 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 PDCL2Q8N4E4 241 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 TAS1R2Q8TE23 839 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 FAM84AQ96KN4 292 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 CLSTN3Q9BQT9 956 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 XYLT2Q9H1B5 865 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 PLEKHA4Q9H4M7 779 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 FAM124BQ9H5Z6 455 aaPredicted RBP12.68□□□□□ -0.38
SNCA-202ENST00000345009 FANCLQ9NW38 375 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 FBXL5Q9UKA1 691 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 COG5Q9UP83 839 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 COQ4Q9Y3A0 265 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 PCDHGC5Q9Y5F6 944 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 CDY1Q9Y6F8 540 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 PLXNA4Q9HCM2 1894 aa12.68□□□□□ -0.38
SNCA-202ENST00000345009 GOLGA6L19H0YKK7 550 aa12.67□□□□□ -0.38
SNCA-202ENST00000345009 TACC1O75410 805 aa12.67□□□□□ -0.38
SNCA-202ENST00000345009 VNN1O95497 513 aa12.67□□□□□ -0.38
SNCA-202ENST00000345009 CPB1P15086 417 aa12.67□□□□□ -0.38
SNCA-202ENST00000345009 HOXB8P17481 243 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms