RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 NR1H2P55055 460 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 NUP107P57740 925 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 KRT17Q04695 432 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 NONOQ15233 471 aaKnown RBP eCLIP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 PTPROQ16827 1216 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 EAPPQ56P03 285 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 C1orf146Q5VVC0 180 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 TTC27Q6P3X3 843 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 RIPOR1Q6ZS17 1223 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 ADAT2Q7Z6V5 191 aaKnown RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 AHI1Q8N157 1196 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 CATSPER1Q8NEC5 780 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF75CPQ92670 426 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 VTI1AQ96AJ9 217 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 ALKBH8Q96BT7 664 aaKnown RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 MTBPQ96DY7 904 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 CRAMP1Q96RY5 1269 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 HAUS8Q9BT25 410 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 RBM38Q9H0Z9 239 aaKnown RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 C1orf21Q9H246 121 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 CCDC68Q9H2F9 335 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 GPCPD1Q9NPB8 672 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 ARL8BQ9NVJ2 186 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 PCDHA6Q9UN73 950 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 FAM32AQ9Y421 112 aaKnown RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 PCDHA8Q9Y5H6 950 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 MYPNQ86TC9 1320 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 EXOC1LA0A1B0GW35 172 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 GSTTP1A0A1W2PQM5 241 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 SLC16A3O15427 465 aaKnown RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 BUD23O43709 281 aaKnown RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 SERPINB7O75635 380 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 XRCC5P13010 732 aaKnown RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF12P17014 697 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 KRT15P19012 456 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 PHBP35232 272 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 PPARGP37231 505 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 TBL3Q12788 808 aaKnown RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 COASYQ13057 564 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF211Q13398 564 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 SLC39A6Q13433 755 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 UBE4AQ14139 1066 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 NDUFA5Q16718 116 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 RWDD4Q6NW29 188 aaKnown RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 UGT2A3Q6UWM9 527 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 RNF207Q6ZRF8 634 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 NANOGNBQ7Z5D8 188 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 SLC13A5Q86YT5 568 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-201ENST00000343524 LCORLQ8N3X6 602 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 SLC30A5Q8TAD4 765 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 LRRC15Q8TF66 581 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 MAML1Q92585 1016 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 KCNN1Q92952 543 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 COX4I2Q96KJ9 171 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 DHRS1Q96LJ7 313 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 BEGAINQ9BUH8 593 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 STK33Q9BYT3 514 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 NACA2Q9H009 215 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF696Q9H7X3 374 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 SLCO1B3Q9NPD5 702 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 HEY2Q9UBP5 337 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 SLC24A2Q9UI40 661 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 ASAP1Q9ULH1 1129 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 STX8Q9UNK0 236 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 AK5Q9Y6K8 562 aa8.56□□□□□ -1.04
ATG4A-201ENST00000343524 H3BNX3 289 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 DENRO43583 198 aaKnown RBP8.55□□□□□ -1.04
ATG4A-201ENST00000343524 KRT38O76015 456 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 CAMTA2O94983 1202 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 CSF1RP07333 972 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 FGRP09769 529 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 SMIM18P0DKX4 95 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 SLC5A1P13866 664 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 AMPD1P23109 780 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 COPB2P35606 906 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 SOX10P56693 466 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 ARPC4P59998 168 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 CDK18Q07002 472 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 GRB10Q13322 594 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 DGKZQ13574 1117 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 CTTNQ14247 550 aaKnown RBP8.55□□□□□ -1.04
ATG4A-201ENST00000343524 PUM3Q15397 648 aaKnown RBP8.55□□□□□ -1.04
ATG4A-201ENST00000343524 KRT79Q5XKE5 535 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 NEK8Q86SG6 692 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 TMEM126BQ8IUX1 230 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 ULK2Q8IYT8 1036 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 CYP4X1Q8N118 509 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 OGFOD1Q8N543 542 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 PYROXD1Q8WU10 500 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 PRPF31Q8WWY3 499 aaKnown RBP8.55□□□□□ -1.04
ATG4A-201ENST00000343524 ATP6V0A1Q93050 837 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 HPS3Q969F9 1004 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 SGF29Q96ES7 293 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 DNAJC1Q96KC8 554 aaKnown RBP8.55□□□□□ -1.04
ATG4A-201ENST00000343524 TTC1Q99614 292 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 ARPC5LQ9BPX5 153 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 CRNKL1Q9BZJ0 848 aaKnown RBP8.55□□□□□ -1.04
ATG4A-201ENST00000343524 VPS11Q9H270 941 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 PARVBQ9HBI1 364 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 S100A14Q9HCY8 104 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms