RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 RERGLQ9H628 205 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 POLBP06746 335 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 ZNF790Q6PG37 636 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 VSTM4Q8IW00 320 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 C3orf20Q8ND61 904 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 VPS33BQ9H267 617 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 CAAP1Q9H8G2 361 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 MAN1B1Q9UKM7 699 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 ENO2P09104 434 aaPredicted RBP18.35■□□□□ 0.53
SMAD4-201ENST00000342988 NCAM1P13591 858 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 SP100P23497 879 aaPredicted RBP18.35■□□□□ 0.53
SMAD4-201ENST00000342988 SLC10A4Q96EP9 437 aa18.35■□□□□ 0.53
SMAD4-201ENST00000342988 CDH16O75309 829 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 GRIK1P39086 918 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 FAM102AQ5T9C2 384 aaPredicted RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 ARL6IP4Q66PJ3 421 aaKnown RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 ULK2Q8IYT8 1036 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 C6orf62Q9GZU0 229 aaPredicted RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 TMA7Q9Y2S6 64 aaKnown RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 TPP2P29144 1249 aaPredicted RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 OTOAQ7RTW8 1153 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 SGSM3Q96HU1 749 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 DHX35Q9H5Z1 703 aaKnown RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 ZNF200P98182 395 aaPredicted RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 SLC30A1Q9Y6M5 507 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 TCP10L2B9ZVM9 353 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 ITGA3P26006 1051 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 KANSL2Q9H9L4 492 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 ATP6V1HQ9UI12 483 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 LINC00854A0A1B0GVQ3 168 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 KPNA6O60684 536 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 ATP9AO75110 1047 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 AGTP01019 485 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 GYS1P13807 737 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 CDH6P55285 790 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 CRYMQ14894 314 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 MED15Q96RN5 788 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 KLHL4Q9C0H6 718 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 SOAT2O75908 522 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 SLC39A14Q15043 492 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 NEK5Q6P3R8 708 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 TSPAN14Q8NG11 270 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 ZFRQ96KR1 1074 aaKnown RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 TRIM49BA6NDI0 452 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 TRIM49D1C9J1S8 452 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 PLCG1P19174 1290 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 EIF3EP60228 445 aaKnown RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 CDC16Q13042 620 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 SKIV2LQ15477 1246 aaKnown RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 SCARA3Q6AZY7 606 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 IFNEQ86WN2 208 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 PSMA8Q8TAA3 256 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 USP28Q96RU2 1077 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 MRPL4Q9BYD3 311 aaKnown RBP18.34■□□□□ 0.53
SMAD4-201ENST00000342988 KLHL28Q9NXS3 571 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 ZNF112Q9UJU3 913 aa18.34■□□□□ 0.53
SMAD4-201ENST00000342988 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 HEATR9A2RTY3 570 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 MTSS1O43312 755 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 APOC1P02654 83 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 GPC1P35052 558 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 SPRP35270 261 aaPredicted RBP18.33■□□□□ 0.53
SMAD4-201ENST00000342988 CYP24A1Q07973 514 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 NCAPHQ15003 741 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 ZNF284Q2VY69 593 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 TIMM50Q3ZCQ8 353 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 OLFML2AQ68BL7 652 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 BNIPLQ7Z465 357 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 POLR1BQ9H9Y6 1135 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 DLGAP2Q9P1A6 1054 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 MDH1BQ5I0G3 518 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 STK33Q9BYT3 514 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 CATSPERBQ9H7T0 1116 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 CCDC162PA2VCL2 907 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 M0QYV0 167 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 CASP12Q6UXS9 341 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 ARHGEF26Q96DR7 871 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 ZNF560Q96MR9 790 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 KLHL1Q9NR64 748 aa18.33■□□□□ 0.53
SMAD4-201ENST00000342988 HOXD10P28358 340 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.33■□□□□ 0.52
SMAD4-201ENST00000342988 VWA5AO00534 786 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 TIMM44O43615 452 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 MZT2AQ6P582 158 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 MARK2Q7KZI7 788 aaKnown RBP18.33■□□□□ 0.52
SMAD4-201ENST00000342988 MARK1Q9P0L2 795 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 PCDHGA3Q9Y5H0 932 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 SMAPO00193 183 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 MYL3P08590 195 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 BYSLQ13895 437 aaKnown RBP18.33■□□□□ 0.52
SMAD4-201ENST00000342988 SV2CQ496J9 727 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 GPD1LQ8N335 351 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 SNX24Q9Y343 169 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 NPATQ14207 1427 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 CCDC182A6NF36 153 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 ZNF23P17027 643 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 ARL3P36405 182 aa18.33■□□□□ 0.52
SMAD4-201ENST00000342988 CAMK2GQ13555 558 aaPredicted RBP18.33■□□□□ 0.52
SMAD4-201ENST00000342988 SCFD2Q8WU76 684 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms