RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 VRK3Q8IV63 474 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 CMTR2Q8IYT2 770 aaKnown RBP3.84□□□□□ -1.79
LRRC39-201ENST00000342895 MIER2Q8N344 545 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 AGAP3Q96P47 875 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 GTPBP4Q9BZE4 634 aaKnown RBP3.84□□□□□ -1.79
LRRC39-201ENST00000342895 ALDH8A1Q9H2A2 487 aaPredicted RBP3.84□□□□□ -1.79
LRRC39-201ENST00000342895 GALNT9Q9HCQ5 603 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 MAN1C1Q9NR34 630 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 JKAMPQ9P055 326 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 ANKFY1Q9P2R3 1169 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 SERPINB13Q9UIV8 391 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 ODF2LQ9ULJ1 636 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 NOL7Q9UMY1 257 aaKnown RBP3.84□□□□□ -1.79
LRRC39-201ENST00000342895 SLC45A1Q9Y2W3 748 aa3.84□□□□□ -1.79
LRRC39-201ENST00000342895 CFAP65Q6ZU64 1925 aaKnown RBP3.84□□□□□ -1.79
LRRC39-201ENST00000342895 KIAA0391O15091 583 aaKnown RBP3.84□□□□□ -1.8
LRRC39-201ENST00000342895 GRM6O15303 877 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 SLC16A6O15403 523 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 PRSS23O95084 383 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 IPO7O95373 1038 aaKnown RBP3.84□□□□□ -1.8
LRRC39-201ENST00000342895 GPANK1O95872 356 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 ANXA1P04083 346 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 ZNF853P0CG23 659 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 U2AF1L5P0DN76 240 aaPredicted RBP3.84□□□□□ -1.8
LRRC39-201ENST00000342895 HKR1P10072 659 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 VCAM1P19320 739 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 ATICP31939 592 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 ABCD1P33897 745 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 U2AF1Q01081 240 aaKnown RBP eCLIP3.84□□□□□ -1.8
LRRC39-201ENST00000342895 DSC2Q02487 901 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 SLFN5Q08AF3 891 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 TP53BP2Q13625 1128 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 SMN1Q16637 294 aaKnown RBP3.84□□□□□ -1.8
LRRC39-201ENST00000342895 KLHL10Q6JEL2 608 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 FOXR2Q6PJQ5 311 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 SKAP1Q86WV1 359 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 LCORLQ8N3X6 602 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 PRR18Q8N4B5 295 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 SLC9A6Q92581 669 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 CLPTM1LQ96KA5 538 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 NAP1L4Q99733 375 aaKnown RBP3.84□□□□□ -1.8
LRRC39-201ENST00000342895 ALOXE3Q9BYJ1 711 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 SIDT1Q9NXL6 827 aaKnown RBP3.84□□□□□ -1.8
LRRC39-201ENST00000342895 MAP3K2Q9Y2U5 619 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 NEU2Q9Y3R4 380 aa3.84□□□□□ -1.8
LRRC39-201ENST00000342895 KIF16BQ96L93 1317 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 ERN1O75460 977 aaKnown RBP3.83□□□□□ -1.8
LRRC39-201ENST00000342895 ARIH2O95376 493 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 TPM2P07951 284 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 RRM1P23921 792 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 SLC6A4P31645 630 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 ZNF132P52740 706 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 NOMO3P69849 1222 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 CYP2A13Q16696 494 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 UAP1L1Q3KQV9 507 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 NOMO2Q5JPE7 1267 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 GADL1Q6ZQY3 521 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 ZBTB46Q86UZ6 589 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 IQCF2Q8IXL9 164 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 LMNTD2Q8IXW0 634 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 CPA6Q8N4T0 437 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 SUPT20HQ8NEM7 779 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 ASB10Q8WXI3 467 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 RUNDC1Q96C34 613 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 NUP88Q99567 741 aaPredicted RBP3.83□□□□□ -1.8
LRRC39-201ENST00000342895 SLX1AQ9BQ83 275 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 ZSWIM1Q9BR11 485 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 POLR3CQ9BUI4 534 aaPredicted RBP3.83□□□□□ -1.8
LRRC39-201ENST00000342895 DDX56Q9NY93 547 aaKnown RBP3.83□□□□□ -1.8
LRRC39-201ENST00000342895 TCEAL9Q9UHQ7 104 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 ACAD8Q9UKU7 415 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 POLHQ9Y253 713 aa3.83□□□□□ -1.8
LRRC39-201ENST00000342895 POLR2AP24928 1970 aaKnown RBP3.82□□□□□ -1.8
LRRC39-201ENST00000342895 CCDC78A2IDD5 438 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 CDHR4A6H8M9 788 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 UNC119BA6NIH7 251 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 TRIM64CA6NLI5 447 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 DTNBO60941 627 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 LDHAP00338 332 aaKnown RBP3.82□□□□□ -1.8
LRRC39-201ENST00000342895 LMNAP02545 664 aaKnown RBP3.82□□□□□ -1.8
LRRC39-201ENST00000342895 S100BP04271 92 aaPredicted RBP3.82□□□□□ -1.8
LRRC39-201ENST00000342895 FTH1P19P0C7X4 201 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 CAPN2P17655 700 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 AKAP5P24588 427 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 CYP2C19P33261 490 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 ADRA1BP35368 520 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 NEK2P51955 445 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 VAV2P52735 878 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 HSD11B2P80365 405 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 WASHC5Q12768 1159 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 SIM2Q14190 667 aaPredicted RBP3.82□□□□□ -1.8
LRRC39-201ENST00000342895 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 L1TD1Q5T7N2 865 aaKnown RBP3.82□□□□□ -1.8
LRRC39-201ENST00000342895 THEMIS2Q5TEJ8 643 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 ZNF365Q70YC5 407 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 SAMD3Q8N6K7 520 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 AOPEPQ8N6M6 819 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 Q8NA96 180 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 BEND2Q8NDZ0 799 aa3.82□□□□□ -1.8
LRRC39-201ENST00000342895 TBC1D15Q8TC07 691 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms