RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 EIF2B5Q13144 721 aaKnown RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 TTC39BQ5VTQ0 682 aaPredicted RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 GPAT2Q6NUI2 795 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 ZNF677Q86XU0 584 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 TNIP2Q8NFZ5 429 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 ABCC3O15438 1527 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 RSPH10B2B2RC85 870 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 SMAPO00193 183 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 ALDH1A2O94788 518 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 RSPH10BP0C881 870 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 CHRM3P20309 590 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 ALDH7A1P49419 539 aaKnown RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 MRPL28Q13084 256 aaKnown RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 MAPRE1Q15691 268 aaKnown RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 PCDHB2Q9Y5E7 798 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 H7C4K7 107 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 RHOBTB3O94955 611 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 WDR47O94967 919 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 RPS12P25398 132 aaKnown RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 SF3B3Q15393 1217 aaKnown RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 CYTH1Q15438 398 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 CHMP2BQ9UQN3 213 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 SSU72P8A0A1W2PR75 194 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 H2AFYO75367 372 aaKnown RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 CNGA3Q16281 694 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 LONRF1Q17RB8 773 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 NAPEPLDQ6IQ20 393 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 BBS7Q8IWZ6 715 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 HPDLQ96IR7 371 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 PRPF18Q99633 342 aaKnown RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 NDEL1Q9GZM8 345 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 NPHS2Q9NP85 383 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 LRIG3Q6UXM1 1119 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 ADCK1Q86TW2 530 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 VPS37AQ8NEZ2 397 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 CMTM5Q96DZ9 223 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 MS4A14Q96JA4 679 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 LRRC1Q9BTT6 524 aa15.9■□□□□ 0.14
COL11A2-201ENST00000341947 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.9■□□□□ 0.14
COL11A2-201ENST00000341947 GTF2H1P32780 548 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 CENPAP49450 140 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 NLRP11P59045 1033 aaKnown RBP15.89■□□□□ 0.13
COL11A2-201ENST00000341947 SFSWAPQ12872 951 aaKnown RBP15.89■□□□□ 0.13
COL11A2-201ENST00000341947 DYNC1I2Q13409 638 aaKnown RBP15.89■□□□□ 0.13
COL11A2-201ENST00000341947 TSGA10IPQ3SY00 556 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 DEPDC1Q5TB30 811 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 UGT3A1Q6NUS8 523 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 SPATA18Q8TC71 538 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 WEE2P0C1S8 567 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 TMEM132BQ14DG7 1078 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 EDRF1Q3B7T1 1238 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 ZNF513Q8N8E2 541 aaPredicted RBP15.89■□□□□ 0.13
COL11A2-201ENST00000341947 FAM167BQ9BTA0 163 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 BRD8Q9H0E9 1235 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 STN1Q9H668 368 aaKnown RBP15.89■□□□□ 0.13
COL11A2-201ENST00000341947 CDH16O75309 829 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 KCNK10P57789 538 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 EXOSC10Q01780 885 aaKnown RBP15.89■□□□□ 0.13
COL11A2-201ENST00000341947 C11orf96Q7Z7L8 435 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 GID8Q9NWU2 228 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 VPS9D1Q9Y2B5 631 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 USP27XA6NNY8 438 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 NBPF26B4DH59 902 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 ANKRD65E5RJM6 399 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 UBXN8O00124 270 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 PDHBP11177 359 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 VCAM1P19320 739 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 SLC11A2P49281 568 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 ZC2HC1CQ53FD0 456 aaPredicted RBP15.89■□□□□ 0.13
COL11A2-201ENST00000341947 STYK1Q6J9G0 422 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 PLD3Q8IV08 490 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 ANKRD13AQ8IZ07 590 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 NBPF15Q8N660 670 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 GLT1D1Q96MS3 346 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 ABI2Q9NYB9 513 aaPredicted RBP15.89■□□□□ 0.13
COL11A2-201ENST00000341947 ITIH6Q6UXX5 1313 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 SLC2A3P11169 496 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 EPB42P16452 691 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 NAB2Q15742 525 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 SGO1Q5FBB7 561 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 LINC00523Q86TU6 105 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 CLEC10AQ8IUN9 316 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 DNAJC7Q99615 494 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 FHOD1Q9Y613 1164 aa15.89■□□□□ 0.13
COL11A2-201ENST00000341947 PLA2R1Q13018 1463 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 MYMKA6NI61 221 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 APOA4P06727 396 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 UBE3AQ05086 875 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 ADAM33Q9BZ11 813 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 FOXP3Q9BZS1 431 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 YIPF3Q9GZM5 350 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 ANKEF1Q9NU02 776 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.88■□□□□ 0.13
COL11A2-201ENST00000341947 C2CD2LO14523 706 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 P4HA2O15460 535 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 TCF3P15923 654 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 PCYT1AP49585 367 aa15.88■□□□□ 0.13
COL11A2-201ENST00000341947 ZNF177Q13360 481 aaPredicted RBP15.88■□□□□ 0.13
COL11A2-201ENST00000341947 TERF2Q15554 542 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms