RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 DENND2CQ68D51 928 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 PASD1Q8IV76 773 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 MYCBPAPQ8TBZ2 947 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 ZNF473Q8WTR7 871 aaKnown RBP15.95■□□□□ 0.14
TPM3-208ENST00000341485 TRIB2Q92519 343 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 PPP1R16BQ96T49 567 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 TCHPQ9BT92 498 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 SEMA4AQ9H3S1 761 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 MTRF1LQ9UGC7 380 aaKnown RBP15.95■□□□□ 0.14
TPM3-208ENST00000341485 NUB1Q9Y5A7 615 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 TTLL13PA6NNM8 815 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 MSCO60682 206 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 ECEL1O95672 775 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 SLC1A1P43005 524 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 MAGEA9P43362 315 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 NOMO3P69849 1222 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 BEX3Q00994 111 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 MFSD10Q14728 455 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 SGO2Q562F6 1265 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 TMEM270Q6UE05 265 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 HOOK3Q86VS8 718 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 LINC01465Q8N7H1 131 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 SLCO2A1Q92959 643 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 DDX27Q96GQ7 796 aaKnown RBP15.95■□□□□ 0.14
TPM3-208ENST00000341485 SCLT1Q96NL6 688 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 CCT8L2Q96SF2 557 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 C11orf70Q9BRQ4 267 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 PLVAPQ9BX97 442 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 SETD4Q9NVD3 440 aa15.95■□□□□ 0.14
TPM3-208ENST00000341485 KAT6AQ92794 2004 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 E7EVH7 732 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 VTNP04004 478 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 SMIM10L2AP0DMW4 78 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 SMIM10L2BP0DMW5 78 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 GNA15P30679 374 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 PSEN2P49810 448 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 NOP14P78316 857 aaKnown RBP15.94■□□□□ 0.14
TPM3-208ENST00000341485 SLC29A2Q14542 456 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 DAB2IPQ5VWQ8 1189 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 ZBTB33Q86T24 672 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 RBBP8NLQ8NC74 664 aaPredicted RBP15.94■□□□□ 0.14
TPM3-208ENST00000341485 TRPV1Q8NER1 839 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 FAM107BQ9H098 131 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 PPANQ9NQ55 473 aaKnown RBP15.94■□□□□ 0.14
TPM3-208ENST00000341485 CHST7Q9NS84 486 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 CNTN6Q9UQ52 1028 aa15.94■□□□□ 0.14
TPM3-208ENST00000341485 ACKR2O00590 384 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 TOM1L1O75674 476 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 TRPA1O75762 1119 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 PROSCO94903 275 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 CYBAP13498 195 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 SNX1Q13596 522 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 FSCN1Q16658 493 aaKnown RBP15.93■□□□□ 0.14
TPM3-208ENST00000341485 LIN9Q5TKA1 542 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 TRIM72Q6ZMU5 477 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 B4GALNT4Q76KP1 1039 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 NLRP7Q8WX94 980 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 KAT2BQ92831 832 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 ACO2Q99798 780 aaKnown RBP15.93■□□□□ 0.14
TPM3-208ENST00000341485 KATNAL1Q9BW62 490 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 NFKBIZQ9BYH8 718 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 NRCAMQ92823 1304 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 A0A087WZ62 844 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 O00370 1275 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 DUSP11O75319 330 aaKnown RBP15.93■□□□□ 0.14
TPM3-208ENST00000341485 FAM107AO95990 144 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 PAEPP09466 180 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 C6orf222P0C671 652 aaPredicted RBP15.93■□□□□ 0.14
TPM3-208ENST00000341485 FGFR4P22455 802 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 TBXAS1P24557 533 aaPredicted RBP15.93■□□□□ 0.14
TPM3-208ENST00000341485 YY1P25490 414 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 KRT17Q04695 432 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 MBTD1Q05BQ5 628 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 POU5F1BQ06416 359 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 PTP4A2Q12974 167 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 PPP1R7Q15435 360 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 MARCH8Q5T0T0 291 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 ZNF784Q8NCA9 323 aaPredicted RBP15.93■□□□□ 0.14
TPM3-208ENST00000341485 ATG4AQ8WYN0 398 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 FDXACB1Q9BRP7 624 aaPredicted RBP15.93■□□□□ 0.14
TPM3-208ENST00000341485 FZD8Q9H461 694 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 PRMT7Q9NVM4 692 aaPredicted RBP15.93■□□□□ 0.14
TPM3-208ENST00000341485 ADAM22Q9P0K1 906 aa15.93■□□□□ 0.14
TPM3-208ENST00000341485 TP73O15350 636 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 RARGP13631 454 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 TNFSF9P41273 254 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 MAMLD1Q13495 774 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 NCOA4Q13772 614 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 ATF7IP2Q5U623 682 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 MMS22LQ6ZRQ5 1243 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 PHF13Q86YI8 300 aaPredicted RBP15.92■□□□□ 0.14
TPM3-208ENST00000341485 BRSK2Q8IWQ3 736 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 UBR7Q8N806 425 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 UHMK1Q8TAS1 419 aaKnown RBP15.92■□□□□ 0.14
TPM3-208ENST00000341485 FAM129AQ9BZQ8 928 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 DCLK3Q9C098 648 aa15.92■□□□□ 0.14
TPM3-208ENST00000341485 RIPK2O43353 540 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 THAP12O43422 761 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 TRAPPC3O43617 180 aa15.91■□□□□ 0.14
TPM3-208ENST00000341485 FAM189A1O60320 539 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms