RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ASB3Q9Y575 518 aa21.73■■□□□ 1.07
SYNE2-201ENST00000341472 MOSPD3O75425 235 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 KRT19P08727 400 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 SLFN14P0C7P3 912 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 CMA1P23946 247 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 MRE11P49959 708 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 SNRPFP62306 86 aaKnown RBP21.72■■□□□ 1.07
SYNE2-201ENST00000341472 SMARCB1Q12824 385 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 CUL4BQ13620 913 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 SLC44A4Q53GD3 710 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 FAM78AQ5JUQ0 283 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 DNAJB7Q7Z6W7 309 aaPredicted RBP21.72■■□□□ 1.07
SYNE2-201ENST00000341472 LRRC52Q8N7C0 313 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 SCFD1Q8WVM8 642 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 ELSPBP1Q96BH3 223 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 PLA2G2FQ9BZM2 168 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 ZFP14Q9HCL3 533 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 SERTAD1Q9UHV2 236 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 ZDHHC9Q9Y397 364 aa21.72■■□□□ 1.07
SYNE2-201ENST00000341472 TGFB1I1O43294 461 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 HUS1O60921 280 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 TMEM191BP0C7N4 346 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 GJA1P17302 382 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 EHHADHQ08426 723 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 SNW1Q13573 536 aaKnown RBP21.71■■□□□ 1.07
SYNE2-201ENST00000341472 DUOXA2Q1HG44 320 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 HS2ST1Q7LGA3 356 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 LRRTM3Q86VH5 581 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 CBWD2Q8IUF1 395 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 NELFCDQ8IXH7 590 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 DCP1BQ8IZD4 617 aaKnown RBP21.71■■□□□ 1.07
SYNE2-201ENST00000341472 DTWD2Q8NBA8 298 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 LEO1Q8WVC0 666 aaPredicted RBP21.71■■□□□ 1.07
SYNE2-201ENST00000341472 ZSWIM3Q96MP5 696 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 GPR88Q9GZN0 384 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 DNAJC25Q9H1X3 360 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 SLC39A2Q9NP94 309 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 AGPAT3Q9NRZ7 376 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 INTS13Q9NVM9 706 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 SIT1Q9Y3P8 196 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 WDFY4Q6ZS81 3184 aa21.71■■□□□ 1.07
SYNE2-201ENST00000341472 STARD6P59095 220 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 KRT85P78386 507 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 BFSP1Q12934 665 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 MGAT5BQ3V5L5 792 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 ITIH5Q86UX2 942 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 CCDC105Q8IYK2 499 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 RDH13Q8NBN7 331 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 CXorf38Q8TB03 319 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 FAM200AQ8TCP9 573 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 C2orf15Q8WU43 125 aaKnown RBP21.7■■□□□ 1.06
SYNE2-201ENST00000341472 SMARCD2Q92925 531 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 PAGE5Q96GU1 130 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 ANKRD36BP1Q96IX9 119 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 FAM84AQ96KN4 292 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 SPATA32Q96LK8 384 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 ASB16Q96NS5 453 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 LRRC3Q9BY71 257 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 MTMR12Q9C0I1 747 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 FAM86C1Q9NVL1 165 aa21.7■■□□□ 1.06
SYNE2-201ENST00000341472 DOCK6Q96HP0 2047 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 DOCK8Q8NF50 2099 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 NRG2O14511 850 aaPredicted RBP21.69■■□□□ 1.06
SYNE2-201ENST00000341472 CLIC2O15247 247 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 SOAT2O75908 522 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 TNNC2P02585 160 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 CDR1P51861 262 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 TSPY1Q01534 308 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 PRKCQQ04759 706 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 TEAD2Q15562 447 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 SCARA3Q6AZY7 606 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 GRAMD1CQ8IYS0 662 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 TMEM86AQ8N2M4 240 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 PDCL2Q8N4E4 241 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 TTC9BQ8N6N2 239 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 SHKBP1Q8TBC3 707 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 PHOX2BQ99453 314 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 SEPT5Q99719 369 aaPredicted RBP21.69■■□□□ 1.06
SYNE2-201ENST00000341472 GDAP2Q9NXN4 497 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 USP25Q9UHP3 1055 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 SIX4Q9UIU6 781 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 ATP6V1DQ9Y5K8 247 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 SNX9Q9Y5X1 595 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 UBE4BO95155 1302 aa21.69■■□□□ 1.06
SYNE2-201ENST00000341472 A0A1B0GVL5 298 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 A0A1W2PRU2 124 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 FGF19O95750 216 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 CYP2J2P51589 502 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 MYO1EQ12965 1108 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 VEPH1Q14D04 833 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 MLF2Q15773 248 aaPredicted RBP21.68■■□□□ 1.06
SYNE2-201ENST00000341472 TAF12Q16514 161 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 LMBRD2Q68DH5 695 aaPredicted RBP21.68■■□□□ 1.06
SYNE2-201ENST00000341472 TMC8Q8IU68 726 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 XXYLT1Q8NBI6 393 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 OR5B17Q8NGF7 314 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 ZSCAN18Q8TBC5 510 aaPredicted RBP21.68■■□□□ 1.06
SYNE2-201ENST00000341472 SPPL2BQ8TCT7 592 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 PSMG2Q969U7 264 aa21.68■■□□□ 1.06
SYNE2-201ENST00000341472 ACBD6Q9BR61 282 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms