RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TPGS2Q68CL5 300 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 FOXR2Q6PJQ5 311 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 RNF19BQ6ZMZ0 732 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 C15orf39Q6ZRI6 1047 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 GPR149Q86SP6 731 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 THEM5Q8N1Q8 247 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 TOP6BLQ8N6T0 577 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 MLKLQ8NB16 471 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 CMASQ8NFW8 434 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-201ENST00000340074 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
UBE3B-201ENST00000340074 ELMO3Q96BJ8 720 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 ZDHHC7Q9NXF8 308 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 PTPRDP23468 1912 aa16.37■□□□□ 0.21
UBE3B-201ENST00000340074 SEC24AO95486 1093 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 STAU1O95793 577 aaKnown RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 ATICP31939 592 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 GPR17Q13304 367 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 UVSSAQ2YD98 709 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 DPCR1Q3MIW9 517 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 PPM1LQ5SGD2 360 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 ATAT1Q5SQI0 421 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 DPH6Q7L8W6 267 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 FILIP1Q7Z7B0 1213 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 ADGRF2Q8IZF7 708 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 TMEM86AQ8N2M4 240 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 ZNF707Q96C28 371 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 RIPOR3Q96MK2 946 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 CEP63Q96MT8 703 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 PGLYRP2Q96PD5 576 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 POMKQ9H5K3 350 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 DDX43Q9NXZ2 648 aaKnown RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 ARMCX3Q9UH62 379 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 AFF4Q9UHB7 1163 aaKnown RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 NCOR1O75376 2440 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 DOCK8Q8NF50 2099 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 MYH10P35580 1976 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 MYO10Q9HD67 2058 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 PRRG1O14668 218 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 CLSTN1O94985 981 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 PAPLNO95428 1278 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 VNN2O95498 520 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 HLA-DRAP01903 254 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 ELF1P32519 619 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 PIK3CAP42336 1068 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 MTHFRP42898 656 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 NLRP12P59046 1061 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 TNNC1P63316 161 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 ZNF699Q32M78 642 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 DCAF17Q5H9S7 520 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 RBM43Q6ZSC3 357 aaKnown RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 CCDC149Q6ZUS6 474 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 LIMS2Q7Z4I7 341 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 OSTM1Q86WC4 334 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 KBTBD7Q8WVZ9 684 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 NECTIN4Q96NY8 510 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 UHRF1Q96T88 793 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 COL25A1Q9BXS0 654 aaPredicted RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 PRKD2Q9BZL6 878 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 ZCWPW1Q9H0M4 648 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 VRTNQ9H8Y1 702 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 CYP4F11Q9HBI6 524 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 TMEM8AQ9HCN3 771 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 NXF1Q9UBU9 619 aaKnown RBP16.36■□□□□ 0.21
UBE3B-201ENST00000340074 PRKAG3Q9UGI9 489 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 RWDD2AQ9UIY3 292 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
UBE3B-201ENST00000340074 GABRDO14764 452 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 CCL16O15467 120 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 HCRTO43612 131 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 HNRNPA1P09651 372 aaKnown RBP eCLIP16.35■□□□□ 0.21
UBE3B-201ENST00000340074 GTF2H1P32780 548 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 LHX1P48742 406 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 CDR1P51861 262 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 MYL7Q01449 175 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 ZP2Q05996 745 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 SGSM1Q2NKQ1 1148 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 CCDC40Q4G0X9 1142 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 TCERG1LQ5VWI1 586 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 RTL10Q7L3V2 364 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 FRMD5Q7Z6J6 570 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 LRRTM3Q86VH5 581 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 ADHFE1Q8IWW8 467 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 TCEAL8Q8IYN2 117 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 SPATA18Q8TC71 538 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 SMG7Q92540 1137 aaKnown RBP16.35■□□□□ 0.21
UBE3B-201ENST00000340074 MED15Q96RN5 788 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 MRPL45Q9BRJ2 306 aaKnown RBP16.35■□□□□ 0.21
UBE3B-201ENST00000340074 PHF7Q9BWX1 381 aaPredicted RBP16.35■□□□□ 0.21
UBE3B-201ENST00000340074 SRRTQ9BXP5 876 aaKnown RBP16.35■□□□□ 0.21
UBE3B-201ENST00000340074 PIDD1Q9HB75 910 aa16.35■□□□□ 0.21
UBE3B-201ENST00000340074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.35■□□□□ 0.212e-9■■■■■ 409.2
UBE3B-201ENST00000340074 MTMR11A4FU01 709 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 STX10O60499 249 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 ACAT1P24752 427 aaKnown RBP16.34■□□□□ 0.21
UBE3B-201ENST00000340074 HOXA9P31269 272 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 SLC39A12Q504Y0 691 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 ZNF667Q5HYK9 610 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 KRT39Q6A163 491 aa16.34■□□□□ 0.21
UBE3B-201ENST00000340074 SPOPLQ6IQ16 392 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms