RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 TNNC1P63316 161 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 TYRO3Q06418 890 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 SOWAHAQ2M3V2 549 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 WDR72Q3MJ13 1102 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 LEXMQ3ZCV2 418 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 CBWD6Q4V339 395 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 CBWD3Q5JTY5 395 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 CBWD5Q5RIA9 395 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 SYCE2Q6PIF2 218 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 SMRP1Q8NCR6 262 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 KBTBD7Q8WVZ9 684 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 THAP9Q9H5L6 903 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 SFXN1Q9H9B4 322 aa13.79□□□□□ -0.2
SRSF3-201ENST00000339436 CLSTN1O94985 981 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 CPB1P15086 417 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 HOXB8P17481 243 aaPredicted RBP13.78□□□□□ -0.2
SRSF3-201ENST00000339436 NOP14P78316 857 aaKnown RBP13.78□□□□□ -0.2
SRSF3-201ENST00000339436 MYL7Q01449 175 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 CLUL1Q15846 466 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 TPD52L1Q16890 204 aaPredicted RBP13.78□□□□□ -0.2
SRSF3-201ENST00000339436 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 SKOR2Q2VWA4 1001 aaPredicted RBP13.78□□□□□ -0.2
SRSF3-201ENST00000339436 ZNF667Q5HYK9 610 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 ELMSAN1Q6PJG2 1045 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 DPH6Q7L8W6 267 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 IRF2BP1Q8IU81 584 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 FBXL13Q8NEE6 735 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 TAF4BQ92750 862 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 IMPG2Q9BZV3 1241 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 NXF1Q9UBU9 619 aaKnown RBP13.78□□□□□ -0.2
SRSF3-201ENST00000339436 DPP7Q9UHL4 492 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 CD207Q9UJ71 328 aa13.78□□□□□ -0.2
SRSF3-201ENST00000339436 ZNF638Q14966 1978 aaKnown RBP13.77□□□□□ -0.2
SRSF3-201ENST00000339436 DENND4CQ5VZ89 1909 aa13.77□□□□□ -0.2
SRSF3-201ENST00000339436 GABRDO14764 452 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 N4BP1O75113 896 aaKnown RBP13.77□□□□□ -0.21
SRSF3-201ENST00000339436 ABLIM3O94929 683 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 OR4Q2P0C623 313 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 SPATA31D3P0C874 917 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 WARSP23381 471 aaKnown RBP13.77□□□□□ -0.21
SRSF3-201ENST00000339436 FMO5P49326 533 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 ARPP19P56211 112 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 SMAD4Q13485 552 aaKnown RBP13.77□□□□□ -0.21
SRSF3-201ENST00000339436 AAK1Q2M2I8 961 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 LIN9Q5TKA1 542 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 TPGS2Q68CL5 300 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 SPOPLQ6IQ16 392 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 SPATA31D4Q6ZUB0 917 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 OSTM1Q86WC4 334 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.77□□□□□ -0.21
SRSF3-201ENST00000339436 KREMEN2Q8NCW0 462 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 ZNF461Q8TAF7 563 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 ENOX1Q8TC92 643 aaKnown RBP13.77□□□□□ -0.21
SRSF3-201ENST00000339436 HDAC7Q8WUI4 952 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 ATXN2LQ8WWM7 1075 aaKnown RBP13.77□□□□□ -0.21
SRSF3-201ENST00000339436 SEMA4DQ92854 862 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 ELMO3Q96BJ8 720 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 TMEM209Q96SK2 561 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 MMS19Q96T76 1030 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 PI4K2AQ9BTU6 479 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 DNAJC25Q9H1X3 360 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 SMYD3Q9H7B4 428 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
SRSF3-201ENST00000339436 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 COQ4Q9Y3A0 265 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 NFE2L3Q9Y4A8 694 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.77□□□□□ -0.21
SRSF3-201ENST00000339436 OBSL1O75147 1896 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 PATJQ8NI35 1801 aa13.77□□□□□ -0.21
SRSF3-201ENST00000339436 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 PMM2O15305 246 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 LRRN2O75325 713 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 TACC1O75410 805 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 PAPLNO95428 1278 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 P4HA1P13674 534 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 ATF2P15336 505 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 ASPAP45381 313 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 LHX1P48742 406 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 GPR17Q13304 367 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 SCARA5Q6ZMJ2 495 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 FAM114A1Q8IWE2 563 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 THEM5Q8N1Q8 247 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 CMASQ8NFW8 434 aaPredicted RBP13.76□□□□□ -0.21
SRSF3-201ENST00000339436 MRPL45Q9BRJ2 306 aaKnown RBP13.76□□□□□ -0.21
SRSF3-201ENST00000339436 FUCA2Q9BTY2 467 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 ZCWPW1Q9H0M4 648 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 APOBEC3GQ9HC16 384 aaKnown RBP13.76□□□□□ -0.21
SRSF3-201ENST00000339436 RAB20Q9NX57 234 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 AFF4Q9UHB7 1163 aaKnown RBP13.76□□□□□ -0.21
SRSF3-201ENST00000339436 TRIOO75962 3097 aa13.76□□□□□ -0.21
SRSF3-201ENST00000339436 SYCE3A1L190 88 aa13.75□□□□□ -0.21
SRSF3-201ENST00000339436 HCRTO43612 131 aa13.75□□□□□ -0.21
SRSF3-201ENST00000339436 RFPL2O75678 378 aa13.75□□□□□ -0.21
SRSF3-201ENST00000339436 LETM1O95202 739 aaPredicted RBP13.75□□□□□ -0.21
SRSF3-201ENST00000339436 VNN2O95498 520 aa13.75□□□□□ -0.21
SRSF3-201ENST00000339436 C8AP07357 584 aa13.75□□□□□ -0.21
SRSF3-201ENST00000339436 PCSK1P29120 753 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms