RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 UNGP13051 313 aaPredicted RBP15.65■□□□□ 0.1
CBX3-201ENST00000337620 INCA1Q0VD86 236 aa15.65■□□□□ 0.1
CBX3-201ENST00000337620 LRRC26Q2I0M4 334 aa15.65■□□□□ 0.1
CBX3-201ENST00000337620 SMYD5Q6GMV2 418 aa15.65■□□□□ 0.1
CBX3-201ENST00000337620 GLB1LQ6UWU2 654 aa15.65■□□□□ 0.1
CBX3-201ENST00000337620 OR6B3Q8NGW1 331 aa15.65■□□□□ 0.1
CBX3-201ENST00000337620 HEXIM2Q96MH2 286 aaKnown RBP15.65■□□□□ 0.1
CBX3-201ENST00000337620 ALS2CR12Q96Q35 445 aa15.65■□□□□ 0.1
CBX3-201ENST00000337620 GDAP2Q9NXN4 497 aa15.65■□□□□ 0.1
CBX3-201ENST00000337620 HUS1O60921 280 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 CYP1A1P04798 512 aaPredicted RBP15.64■□□□□ 0.09
CBX3-201ENST00000337620 FGFR1P11362 822 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 IGFBP6P24592 240 aaPredicted RBP15.64■□□□□ 0.09
CBX3-201ENST00000337620 NSFP46459 744 aaKnown RBP15.64■□□□□ 0.09
CBX3-201ENST00000337620 GPC5P78333 572 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 GRIK3Q13003 919 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 TRIM72Q6ZMU5 477 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 DPH6Q7L8W6 267 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 APPL2Q8NEU8 664 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 APBB2Q92870 758 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 ARHGEF26Q96DR7 871 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 NAPGQ99747 312 aaPredicted RBP15.64■□□□□ 0.09
CBX3-201ENST00000337620 PAAF1Q9BRP4 392 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 NT5C1AQ9BXI3 368 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 FAM124BQ9H5Z6 455 aaPredicted RBP15.64■□□□□ 0.09
CBX3-201ENST00000337620 ENC1O14682 589 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 MED7O43513 233 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 CLTBP09497 229 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 RPL9P32969 192 aaKnown RBP15.64■□□□□ 0.09
CBX3-201ENST00000337620 TCTN1Q2MV58 587 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 NECAB2Q7Z6G3 386 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 SLC35G2Q8TBE7 412 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 TBX21Q9UL17 535 aa15.64■□□□□ 0.09
CBX3-201ENST00000337620 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.64■□□□□ 0.09
CBX3-201ENST00000337620 SCN5AQ14524 2016 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 TET1Q8NFU7 2136 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 A0A0A6YYK5 440 aaPredicted RBP15.63■□□□□ 0.09
CBX3-201ENST00000337620 CYB561D2O14569 222 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 PALMO75781 387 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 PARNO95453 639 aaKnown RBP15.63■□□□□ 0.09
CBX3-201ENST00000337620 NOMO3P69849 1222 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 TUSC3Q13454 348 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 IFI16Q16666 785 aaKnown RBP15.63■□□□□ 0.09
CBX3-201ENST00000337620 UPP1Q16831 310 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 CLLU1OSQ5K130 101 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 RFFLQ8WZ73 363 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 SNX25Q9H3E2 840 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 OSGEPQ9NPF4 335 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 TMEM161AQ9NX61 479 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 CHORDC1Q9UHD1 332 aaPredicted RBP15.63■□□□□ 0.09
CBX3-201ENST00000337620 L1RE1Q9UN81 338 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 PCDHB7Q9Y5E2 793 aa15.63■□□□□ 0.09
CBX3-201ENST00000337620 A8MXQ7 604 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 ATMINO43313 823 aaPredicted RBP15.62■□□□□ 0.09
CBX3-201ENST00000337620 CXCL10P02778 98 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 PDGFRBP09619 1106 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 VDRP11473 427 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 GNL1P36915 607 aaPredicted RBP15.62■□□□□ 0.09
CBX3-201ENST00000337620 CENPCQ03188 943 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 NOMO2Q5JPE7 1267 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 ACOT1Q86TX2 421 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 C3orf58Q8NDZ4 430 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 URGCPQ8TCY9 931 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 KBTBD7Q8WVZ9 684 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 ZNF653Q96CK0 615 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 CTTNBP2NLQ9P2B4 639 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 LRFN2Q9ULH4 789 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 NCANO14594 1321 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 C2CD6Q53TS8 623 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 SGO2Q562F6 1265 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 DSTYKQ6XUX3 929 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 ADGRF2Q8IZF7 708 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 MCOLN2Q8IZK6 566 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 PDCL2Q8N4E4 241 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 C12orf29Q8N999 325 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 TMEM35BQ8NCS4 154 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 DDX27Q96GQ7 796 aaKnown RBP15.62■□□□□ 0.09
CBX3-201ENST00000337620 SENP8Q96LD8 212 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 PRDM5Q9NQX1 630 aaPredicted RBP15.62■□□□□ 0.09
CBX3-201ENST00000337620 PCDHGC3Q9UN70 934 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 CEP83Q9Y592 693 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 NME7Q9Y5B8 376 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 TDRD15B5MCY1 1934 aaKnown RBP15.62■□□□□ 0.09
CBX3-201ENST00000337620 MYH10P35580 1976 aa15.62■□□□□ 0.09
CBX3-201ENST00000337620 INPPL1O15357 1258 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 HCRTO43612 131 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 B3GAT3O94766 335 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 ATP1A1P05023 1023 aaKnown RBP15.61■□□□□ 0.09
CBX3-201ENST00000337620 RNASELQ05823 741 aaKnown RBP15.61■□□□□ 0.09
CBX3-201ENST00000337620 PAN2Q504Q3 1202 aaKnown RBP15.61■□□□□ 0.09
CBX3-201ENST00000337620 DENND1BQ6P3S1 775 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 PHLDB2Q86SQ0 1253 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 UNC93AQ86WB7 457 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 ABI1Q8IZP0 508 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 TOP6BLQ8N6T0 577 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 C1orf131Q8NDD1 294 aaKnown RBP15.61■□□□□ 0.09
CBX3-201ENST00000337620 TPCN2Q8NHX9 752 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 MCOLN1Q9GZU1 580 aa15.61■□□□□ 0.09
CBX3-201ENST00000337620 ELAC1Q9H777 363 aaKnown RBP15.61■□□□□ 0.09
CBX3-201ENST00000337620 KIAA1257Q9ULG3 409 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms